Query= MSMg01no308_k08.b1 MSMg01no308_k08.b1 CHROMAT_FILE:
MSMg01no308_k08.b1 PHD_FILE: MSMg01no308_k08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:50:01 2005
(213 letters)
>mm_chr1_156488088_156488700
Length = 613
Score = 369 bits (191), Expect = e-107
Identities = 206/211 (97%), Gaps = 2/211 (0%)
Strand = Plus / Plus
Query: 4 ggaattccctcaagttcc-gcgtgttaaaaggtttggctcctgtctcatagaaatcctag 62
|||||||||||||| || | |||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccctcaagg-cctgtgtgttaaaaggtttggctcctgtctcatagaaatcctag 262
Query: 63 gtagagccactgtgagatctgaggctactgatggtgtgacttcaaaggggattgtagagc 122
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gtagagccactgggagatctgaggctactgatggtgtgacttcaaaggggattgtagagc 322
Query: 123 ctgggcctctttactattttacttttcattcaccatgaaatgaacatcttgttccaccat 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ctgggcctctttactattttacttttcattcaccatgaaatgaacatcttgttccaccat 382
Query: 183 atatgtatgtaggtatataggtgtacacaca 213
|||||||||||||||||||||||||||||||
Sbjct: 383 atatgtatgtaggtatataggtgtacacaca 413
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 213
Length of database: 613
Length adjustment: 9
Effective length of query: 204
Effective length of database: 604
Effective search space: 123216
Effective search space used: 123216
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no308_k08.g1 MSMg01no308_k08.g1 CHROMAT_FILE:
MSMg01no308_k08.g1 PHD_FILE: MSMg01no308_k08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:50:01 2005
(229 letters)
>mm_chr1_156659415_156660045
Length = 631
Score = 420 bits (217), Expect = e-122
Identities = 227/231 (98%), Gaps = 2/231 (0%)
Strand = Plus / Minus
Query: 1 acacagacgttgagggttatagaaatatagctttcattatttctagaaccttattcaatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 acacagacgttgagggttatagaaatatagctttcattatttctagaaccttattcaatt 372
Query: 61 tctgagtcccaaaccactttaatagaaaacagcttattcattccaaattcgtggttttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 tctgagtcccaaaccactttaatagaaaacagcttattcattccaaattcgtggttttct 312
Query: 121 tttctttagttgtatccaaagatctagttaagcctcaatttagcattctcttgacaag-- 178
|||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 311 tttctttagttgtatccaaagatctagttaagccccaatttagcattcccttgacaaggt 252
Query: 179 acacattgactaccattatatctcctcaggatttcttttagccgagctggg 229
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 acacattgactaccattatatctcctcaggatttcttttagccgagctggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 229
Length of database: 631
Length adjustment: 9
Effective length of query: 220
Effective length of database: 622
Effective search space: 136840
Effective search space used: 136840
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
