Query= MSMg01no312_b10.b1 MSMg01no312_b10.b1 CHROMAT_FILE:
MSMg01no312_b10.b1 PHD_FILE: MSMg01no312_b10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:53:05 2005
(193 letters)
>mm_chr1_180583000_180583594
Length = 595
Score = 327 bits (169), Expect = 3e-94
Identities = 188/197 (95%), Gaps = 6/197 (3%)
Strand = Plus / Minus
Query: 1 attagccattccctac----ttttttaaaaaaggtaattgaaatcctaggaacactctgg 56
||||||| |||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 395 attagccgttccctactttttttttt--aaaaggtaattgaaatcctaggaacactctgg 338
Query: 57 aagttcagattagctccaaccctttcgccatacgaccccagcttcatcacccaggaatgt 116
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 337 aagttcagattagctccaaccctttcgccatacaaccccagcttcatcacccaggaatgt 278
Query: 117 ggtccagtggctcagttagcatctttgagccttcctcatctacacaaatgggatggcggc 176
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 277 ggtccagtggctcagttagcatctttgagccttcctcatctacacaaatgggatggtggc 218
Query: 177 aacatcatctttgcagt 193
|||||||||||||||||
Sbjct: 217 aacatcatctttgcagt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 193
Length of database: 595
Length adjustment: 8
Effective length of query: 185
Effective length of database: 587
Effective search space: 108595
Effective search space used: 108595
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no312_b10.g1 MSMg01no312_b10.g1 CHROMAT_FILE:
MSMg01no312_b10.g1 PHD_FILE: MSMg01no312_b10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:53:05 2005
(241 letters)
>mm_chr1_180496975_180497615
Length = 641
Score = 451 bits (233), Expect = e-131
Identities = 239/241 (99%)
Strand = Plus / Plus
Query: 1 tatgtgtctgtacttgatatatgatgttaatgtgttatgggattagagaaaagcccacaa 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tatgtgtctgcacttgatatatgatgttaatgtgttatgggattagagaaaagcccacaa 260
Query: 61 ggaatgtgcggtgatgttgatcccagaagactgtttctttactagcttatttatttttaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggaatgtgcggtgatgttgatcccagaagactgtttctttactagcttatttatttttaa 320
Query: 121 tttccaagatggggcctacaatattcccacatctcatttctctcctaaatctcattctcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttccaagatggggcctacaatattcccacatctcatttctctcctaaatctcattctcg 380
Query: 181 cagatgctcacggaaggacaggtaagctatggctgccgcacgttgcattcagtgaggagc 240
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagatgctcacggaaggacagggaagctatggctgccgcacgttgcattcagtgaggagc 440
Query: 241 t 241
|
Sbjct: 441 t 441
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 641
Length adjustment: 9
Effective length of query: 232
Effective length of database: 632
Effective search space: 146624
Effective search space used: 146624
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
