Query= MSMg01no313_j24.b1 MSMg01no313_j24.b1 CHROMAT_FILE:
MSMg01no313_j24.b1 PHD_FILE: MSMg01no313_j24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:55:32 2005
(410 letters)
>mm_chr1_156211733_156212543
Length = 811
Score = 696 bits (360), Expect = 0.0
Identities = 372/376 (98%), Gaps = 1/376 (0%)
Strand = Plus / Minus
Query: 5 gaattcctc-caaggtagaactatttgaattagatatgcttgaaaatttctccaaaattg 63
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 gaattcctcaaaaggtagaactatttgaattagatatgcttgaaaatttctccaaaattg 317
Query: 64 ttaaaagttaacaaaccccctttcagaaaagtcaaccacaaggagaagaatgagaaataa 123
||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 ttaaaagttaacaaacctcatttcagaaaagtcaaccacaaggagaagaatgagaaataa 257
Query: 124 gaacacagcaaggcatagcattaccactttctgaacatcagtaattagggaaatacacat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 gaacacagcaaggcatagcattaccactttctgaacatcagtaattagggaaatacacat 197
Query: 184 agatgagagtatcccttagcacccagcagagaagattctgcttgcagtaaatggtagata 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 agatgagagtatcccttagcacccagcagagaagattctgcttgcagtaaatggtagata 137
Query: 244 acacagagaccccccaagtactcaatgtgcaaaagactgtggcttatttagtcataagtg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 acacagagaccccccaagtactcaatgtgcaaaagactgtggcttatttagtcataagtg 77
Query: 304 ggatttttaatctcaaccctcccccataacttgggaaccttcctggaaaggggacaaaaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 ggatttttaatctcaaccctcccccataacttgggaaccttcctggaaaggggacaaaaa 17
Query: 364 gattgtgagagacaga 379
||||||||||||||||
Sbjct: 16 gattgtgagagacaga 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 410
Length of database: 811
Length adjustment: 9
Effective length of query: 401
Effective length of database: 802
Effective search space: 321602
Effective search space used: 321602
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no313_j24.g1 MSMg01no313_j24.g1 CHROMAT_FILE:
MSMg01no313_j24.g1 PHD_FILE: MSMg01no313_j24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:55:32 2005
(376 letters)
>mm_chr1_156121117_156121892
Length = 776
Score = 694 bits (359), Expect = 0.0
Identities = 371/375 (98%)
Strand = Plus / Plus
Query: 1 catatactttgtttgagagaggaaaaactacttcagacctttgagttttgggcagggact 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 catatactttgtttgagagaggaaaaactacttcagacctttgagttttgggtagggact 260
Query: 61 caaacattcgagcttaagcacacggaagggaatctgttgtaggtggagttttggagggtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caaacattcgagcttaagcacacggaagggaatctgttgtaggtggagttttggagggtt 320
Query: 121 ggactttgtgtgtaagcagtcagttggcactgactctcatagagatgcaatgcaagcttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggactttgtgtgtaagcagtcagttggcactgactctcatagagatgcaatgcaagcttc 380
Query: 181 gatctctttgagaatctgatggcagcaagagatctggggatgccagtgttcctaacctag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gatctctttgagaatctgatggcagcaagagatctggggatgccagtgttcctaacctag 440
Query: 241 cagctcacgagaagtaagctaactgcttctgaaggaagataacatcataccgggcctcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cagctcacgagaagtaagctaactgcttctgaaggaagataacatcataccgggcctcaa 500
Query: 301 ctctcaatgttcagcacttagccttttctaactggacgcacctaaaacaagagaaaataa 360
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 501 ctctcaatgttcagcacttagccaactctaactggacgcacctaaaacaagagaaaataa 560
Query: 361 aagcagacaggaaaa 375
|||||||||||||||
Sbjct: 561 aagcagacaggaaaa 575
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 376
Length of database: 776
Length adjustment: 9
Effective length of query: 367
Effective length of database: 767
Effective search space: 281489
Effective search space used: 281489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
