Query= MSMg01no313_o17.b1 MSMg01no313_o17.b1 CHROMAT_FILE:
MSMg01no313_o17.b1 PHD_FILE: MSMg01no313_o17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:56:10 2005
(363 letters)
>mm_chr1_42558398_42559160
Length = 763
Score = 629 bits (325), Expect = 0.0
Identities = 346/353 (98%), Gaps = 4/353 (1%)
Strand = Plus / Plus
Query: 13 gaattccacagctcttcaa-tgagtaacttttgttcagatgacaaaatgcttgtggcaca 71
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 gaattccacagctcttcaaatgagtaacttttgttcagatgacaaaatgcttgtggcaca 272
Query: 72 ttttgagtaagttgaatagcccgcactttgctctattttctgggtatacactgaagcaaa 131
|||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||
Sbjct: 273 ttttgagtaagttgaatagct-gtattttgctctattttctgggtatacactgaagcaaa 331
Query: 132 gtaacagtgaccaccatc-ggagcttgggacaggacaggtaaaagtagaattaaatagga 190
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 gtaacagtgaccacca-ctggagcttgggacaggacaggtaaaagtagaattaaatagga 390
Query: 191 tcctacagttgaagtgtggatgcccttttgcagccatagaacatccatatatttgaccgg 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 tcctacagttgaagtgtggatgcccttttgcagccatagaacatccatatatttgaccgg 450
Query: 251 cagctttaagcactcactaggtccacactgggatctgttgacacaaaggtgtgtatgttc 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 cagctttaagcactcactaggtccacactgggatctgttgacacaaaggtgtgtatgttc 510
Query: 311 ttttttgtatttgttttgagggttttgatgtcaccaaacttaatttgctcaca 363
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 ttttttgtatttgttttgagggttttgatgtcaccaaacttaatttgctcaca 563
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 363
Length of database: 763
Length adjustment: 9
Effective length of query: 354
Effective length of database: 754
Effective search space: 266916
Effective search space used: 266916
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no313_o17.g1 MSMg01no313_o17.g1 CHROMAT_FILE:
MSMg01no313_o17.g1 PHD_FILE: MSMg01no313_o17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:56:11 2005
(263 letters)
>mm_chr1_42717026_42717688
Length = 663
Score = 501 bits (259), Expect = e-146
Identities = 262/263 (99%)
Strand = Plus / Minus
Query: 1 tgaattgacagcaccacatctgacttaaaaaaataattaattttttaaagcaatggcgac 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 512 tgaattgacagcaccacatctgacttaaaaaaataattaattttttaaagcaatggcgcc 453
Query: 61 ctcccatctagcagaatgcacagtaggtgtgcatagcctccattttatatgccattgtaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 ctcccatctagcagaatgcacagtaggtgtgcatagcctccattttatatgccattgtaa 393
Query: 121 ggatgagttctgtttgaaacctacagagcaaagcacacgtatgtggttcaaacctataat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 ggatgagttctgtttgaaacctacagagcaaagcacacgtatgtggttcaaacctataat 333
Query: 181 ctggcagggtgagaacagaaggtactgactgaggaggcataagttaccctttgccagaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 ctggcagggtgagaacagaaggtactgactgaggaggcataagttaccctttgccagaca 273
Query: 241 atagacggagaaaggagtaagga 263
|||||||||||||||||||||||
Sbjct: 272 atagacggagaaaggagtaagga 250
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 263
Length of database: 663
Length adjustment: 9
Effective length of query: 254
Effective length of database: 654
Effective search space: 166116
Effective search space used: 166116
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
