TCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCGAGAATCCGCGG
AATTCCTACAGAGTTGCTCTGACTGCCCCAGCGCGGGCTGGACTTGCCGC
TGCTCCAGGGTTATTTCCAGGGTTTCCATTCGTGGCTAGCGCTCCCAAGT
AATTGGCCCAAGACCGGTCCCTGTAGGTATCCCTAAGACCTGATAGGCCA
CTCCTTATTGAGGGAACTTCACACCCTTGCCAGCTTCCCCAGCCTCTTTG
CTTTAGAGACGTACCCATCTGGGTATCAAACATAGCAGTCAGTCACTCTC
CCTGGCTACTCTGGGTGCCATGTATAAACTGTCCTCTCCTTCAGCTTCTG
TGGAAGGAGCAGGAACCAGGAATGTCTGGACCGGAAGGAAGCCCCCACAG
CCTGGCTGACCACGACCTTCGCGACTCTATCCCTGGTCAGTTGACCCTCC
AGTAACCCCAGTCATCCCCAACCCCAACAGCCAGCTTTACCTGGCATTCC
AGTTAAACCCACTTAAATACATTTCACACTGCCTCAGAAAAGACTCTCAA
AGGTAGTCTCTCACCAAGATCTCCTTACAACCACATTTTATAAATAGGGA
AACAGGCTCAGAGAAGGCATGCCGCCGACCACAGTTACACAGCAAGCAAC
AAACCACTCCAGTCCTGGGTGCTTTCTACTCTGGCCAAAGCAAAACAGCT
GAATTCACAGTGAAAGAACTGGACAGGAACAAATTGGGTGGAAGGACCC

GAAGCGGGAGGCCCGGNGNCGCCGGTTTTCCCAACCGCNNGAANNANAGA
AGTTGACGGGACCGGGGGGCNNNGACNNGACNANAANNNNAACNGGGNNA
NAGNAATTTTTAGCCCAAAAAAGCGAAGAGAGCANAGCNCCCAGAAACAA
AGGNANACACNNACAGGGGAAAGNNNAGAGGACACGGGAAANCCCCNGGA
AGCAAANAGCCCNCCAAAACCGACACAAGAAAAAACAAAANATTTTTTAC
TTATGTGTCTATTTGATTGAGTCTGAATTAAGAAACATCATTACTAGAAA
ACAAAATTGTTTTTTTTTGTGGCNNACAAACANAAANGAAAAACCCCNAG
NAAAATATCGCCCCCCCCCAGCCNAAAANANAGGGANAGAAACAACGGAN
ANNNACCACGCACCACCCGAGCCAGGGACANAAGCCCANCGNNNNCGGCC
CGGAAAAGAACACGCACCCCGACNAACAAACANAACCCGACCNNCCGCCC
ACGANCAAACGCAAAACCGACNNAACCCGGCCCCCGACAAAGACACAAAG
AACAGAGACCGAAGAAAAGAACGGCACCCCAGCAACAGAGCCAGAAAAAC
CGAGCCCACACACAGAAGAAAGGGACCGGGCCCAAANCCACNACCTTGTT
TTGTTATCGACTAGGGCTGGAACAGAGGCCATCCAGTTAGTAGACTTGAC
TTTGACACCGCTGGAAGAAAAGCCC

Query= MSMg01no317_g23.b1 MSMg01no317_g23.b1 CHROMAT_FILE:
MSMg01no317_g23.b1 PHD_FILE: MSMg01no317_g23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:59:27 2005
         (676 letters)



>mm_chr1_193040235_193041310
          Length = 1076

 Score = 1203 bits (622), Expect = 0.0
 Identities = 660/674 (97%), Gaps = 3/674 (0%)
 Strand = Plus / Plus

                                                                       
Query: 3   ggaattcctacagagttgctctgactgccccagcgcgggctggacttgccgctgctccag 62
           |||||||||||||||  |||||||||||||||||| |||||||||| | |||||||||||
Sbjct: 203 ggaattcctacagagccgctctgactgccccagcgtgggctggactagtcgctgctccag 262

                                                                       
Query: 63  ggttatttccagggtttccattcgtggctagcgctcccaagtaattggcccaagaccggt 122
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ggttatttccagggtttccattcgtggctagcgctcccaagtaattggcccaagaccggt 322

                                                                       
Query: 123 ccctgtaggtatccctaagacctgataggccactccttattgagggaacttcacaccctt 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ccctgtaggtatccctaagacctgataggccactccttattgagggaacttcacaccctt 382

                                                                       
Query: 183 gccagcttccccagcctctttgctttagagacgtacccatctgggtatcaaacatagcag 242
           ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 383 gccagcttccccagcctctttgctttaaagatgtacccatctgggtatcaaacatagcag 442

                                                                       
Query: 243 tcagtcactctccctggctactctgggtgccatgtataaactgtcctctccttcagcttc 302
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tcagtcactctccctggctactctgggtgccatgtataaactgtcctctccttcagcttc 502

                                                                       
Query: 303 tgtggaaggagcaggaaccaggaatgtctggaccggaaggaagcccccacagcctggctg 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tgtggaaggagcaggaaccaggaatgtctggaccggaaggaagcccccacagcctggctg 562

                                                                       
Query: 363 accacgaccttcgcgactctatccctggtcagttgaccctccagtaaccccagtcatccc 422
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 accacgaccttcgtgactctatccctggtcagttgaccctccagtaaccccagtcatccc 622

                                                                       
Query: 423 caaccccaacagccagctttacctggcattccagttaaacccacttaaatacatttcaca 482
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 ccaccccaacagccagctttacctggcattccagttaaacccacttaaatacatttcaca 682

                                                                       
Query: 483 ctgcctcagaaaagactctcaaaggtagtctctcaccaagatctccttacaaccacattt 542
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 683 ctgcctcagaaaagactctcaaacgtagtctctcaccaagatctccttacaaccacattt 742

                                                                       
Query: 543 tataaatagggaaacaggctcagagaaggcatgccgccgaccacagttacacagcaagca 602
           ||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||
Sbjct: 743 tataaatagggaaacaggctcagagaaggcatgccg---accacagttacacagcaagca 799

                                                                       
Query: 603 acaaaccactccagtcctgggtgctttctactctggccaaagcaaaacagctgaattcac 662
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 acaaaccactccagtcctgggtgctttctactctggccaaagcaaaacagctgaattcac 859

                         
Query: 663 agtgaaagaactgg 676
           | ||||||||||||
Sbjct: 860 actgaaagaactgg 873


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 676
Length of database: 1076
Length adjustment: 10
Effective length of query: 666
Effective length of database: 1066
Effective search space:   709956
Effective search space used:   709956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)