TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCATGCAAGCTTCCATGCACACTTGCACATACAGATATGTGCTTTAGG
ATATCTGTTATACAGAGTGTGACCTCTTTATGCTCAACAGCATGTATTAA
CAAAACTGTCCTTTAGCATTACATGCTTTGACATCATTAACAAAAATAGT
ATGTAAATGTATAGATTTAATTGTTGACTCTCACTGTTCCATTGGTCTAT
GTGTCTGTTTTATCCCCATATTTTATGATTTTGAAGACTTACAGTAGATT
TCTAAATGTTGATTGAGATGCTCCATCCAGGTTTATAGTCTCTCTTCCAT
GTTGTCTTAGCTATTTGGTATAATTGTGAATTCAGTTATTTTGTGCTTTC
TTCAGAATCATTTTCTCCTCTTTCTATGAAAAAATTACAAGGGGATTTTG
CGAGTCACTGTATTGCACCTTGCTTTGTTCTATACAGACATTTTAATGAT
GGTTCCAGTCTAAGAACAAAGTATATATTTCCATTTATTTGTATATATTT
CAGATTTAATCAGTGTGCTACAATTTTCACTTCAGAAAAATATCATAGCT
TTTACCCAGCTGTTAAGAAGTCTGTTGTATGATGAACATCTTCCTGGCAT
ACTGCCTTAAGTTTTAGGTCCAACATCTGTGCCAAAAAATAGAAACCTTA
AGTTTGTTTCTAAATAAAATCCTAATTATATATATATATGCTTGCTTAAC
ACACACCTGTGAACCTG

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCAGGGGGAGGGAACTACTGGGAAA
GGGGTGATATTTCAAATGTAAATAAAGATATTTATCCAATAAAACAAGTT
AAAAATTACTCATAGCTATATTCTCTCAAATTTGTATTCTCAATTTTGAT
AGTCTTTGCTGTACTTTATTGTGCCTCTCAGAAGGGGTAGAACTAAAGTT
CAAAACAGTGGTTCACAATTTGTATCTTCTTTTGCCAGACAAGAAGGGGA
AACAGTTTAGTCTTTGAAGAATGCTATGGTTCCGGGTCTCCTCTCTTGGT
ACCCAGATGCTAATAGTGTCCTGCTTGAATTTGGGAATGGGCTGTGCAGT
ATGTGCTTCCCCTCAGGCCGCCTAAATGCTGGGTGGGAAGGGGAAGCTAT
ACATACTTATACACGCTCACACATACACCTACATCATCATTATCATCATC
ATCATCATCATCATCATCATCATCATCATCACTACCATCACCTTCATCAT
TATCATTTCTTTCTGTGGTAGAAATACTAAAACAATTCTTAGAGATAGGG
AGTCAGGAAAATAGTCATCTCCTACAAAAATACAATAACTTTTTAAAAAT
TCCAGTTCATCACTGCAAAAAGATTAGAGAATTTTATGTAGCATTTGTCA
AACTAAATTTAGAATTCTGTAA

Query= MSMg01no317_m09.g1 MSMg01no317_m09.g1 CHROMAT_FILE:
MSMg01no317_m09.g1 PHD_FILE: MSMg01no317_m09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:59:49 2005
         (646 letters)



>mm_chr1_50649638_50650683
          Length = 1046

 Score = 1064 bits (550), Expect = 0.0
 Identities = 609/646 (94%), Gaps = 27/646 (4%)
 Strand = Plus / Minus

                                                                       
Query: 1   cagggggagggaactactgggaaaggggtgatatttcaaatgtaaataaagatatttatc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 cagggggagggaactactgggaaaggggtgatatttcaaatgtaaataaagatatttatc 625

                                                                       
Query: 61  caataaaacaagttaaaaattactcatagctatattctctcaaatttgtattctcaattt 120
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 624 caataaaacaagttaaaaattactcatagctatattctctcaaatttgtactctcaattt 565

                                                                       
Query: 121 tgatagtctttgctgtactttattgtgcctctcagaaggggtagaactaaagttcaaaac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tgatagtctttgctgtactttattgtgcctctcagaaggggtagaactaaagttcaaaac 505

                                                                       
Query: 181 agtggttcacaatttgtatcttcttttgccagacaagaaggggaaacagtttagtctttg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 agtggttcacaatttgtatcttcttttgccagacaagaaggggaaacagtttagtctttg 445

                                                                       
Query: 241 aagaatgctatggttccgggtctcctctcttggtacccagatgctaatagtgtcctgctt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 444 aagaatgctatggttccgggtctcctctcttggtacccagatgctaatagtgtcctgctg 385

                                                                       
Query: 301 gaatttgggaatgggctgtgcagtatgtgcttcccctcaggccgcctaaatgctgggtgg 360
           |||||||||||||||||||||||||||||||||||||||||  |  || |||||||||||
Sbjct: 384 gaatttgggaatgggctgtgcagtatgtgcttcccctcaggttgtttacatgctgggtgg 325

                                                                       
Query: 361 gaaggggaagctatacatacttatacacgctcacacatacacctacatcatcattatcat 420
           |||||||||||||||||||||||||||| |||||||||| |||||               
Sbjct: 324 gaaggggaagctatacatacttatacactctcacacatataccta--------------- 280

                                                                       
Query: 421 catcatcatcatcatcatcatcatcatcatcatcactaccatcaccttcatcattatcat 480
                       ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 ------------catcatcatcatcatcatcatcactaccatcaccttcatcattatcat 232

                                                                       
Query: 481 ttctttctgtggtagaaatactaaaacaattcttagagatagggagtcaggaaaatagtc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 ttctttctgtggtagaaatactaaaacaattcttagagatagggagtcaggaaaatagtc 172

                                                                       
Query: 541 atctcctacaaaaatacaataactttttaaaaattccagttcatcactgcaaaaagatta 600
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 171 atctcctacaaaaatacaataacttttaaaaaattccagttcatcactgcaaaaagatta 112

                                                         
Query: 601 gagaattttatgtagcatttgtcaaactaaatttagaattctgtaa 646
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 gagaattttatgtagcatttgtcaaactaaatttagaattctgtaa 66


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1046
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1036
Effective search space:   658896
Effective search space used:   658896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)