Query= MSMg01no319_a06.b1 MSMg01no319_a06.b1 CHROMAT_FILE:
MSMg01no319_a06.b1 PHD_FILE: MSMg01no319_a06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:01:17 2005
(319 letters)
>mm_chr1_136351907_136352625
Length = 719
Score = 563 bits (291), Expect = e-165
Identities = 309/319 (96%), Gaps = 8/319 (2%)
Strand = Plus / Minus
Query: 5 gaattctttcctctttccc----taaaccttctcccggggcaggcggcagctgctccgga 60
||||||||||| |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 538 gaattctttcc----tcccaggttaaaccttctcccggggcaggcggcagctgctccgga 483
Query: 61 gaagccgagaaggtagcgccatgcctgcagcgccccagctcatctcctaccgacccgggc 120
||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 gaagccgagaaggcagcgctatgcctgcagcgccccagctcatctcctaccgacccgggc 423
Query: 121 tggggggggtacccgggttgggggaaggccgcgcccccggctgagggcagagggaaaggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tggggggggtacccgggttgggggaaggccgcgcccccggctgagggcagagggaaaggc 363
Query: 181 cgtgtgtcagggccgcgctcactcaccagggctcctgggccgtccgagccgaggtgctag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 cgtgtgtcagggccgcgctcactcaccagggctcctgggccgtccgagccgaggtgctag 303
Query: 241 gcgccgggctcccaggcggctgagcagccggagcgccgccgctgccgcccggaccagccg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gcgccgggctcccaggcggctgagcagccggagcgccgccgctgccgcccggaccagccg 243
Query: 301 ctgcggagcagtctccgtg 319
|||||||||||||||||||
Sbjct: 242 ctgcggagcagtctccgtg 224
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no319_a06.g1 MSMg01no319_a06.g1 CHROMAT_FILE:
MSMg01no319_a06.g1 PHD_FILE: MSMg01no319_a06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:01:17 2005
(289 letters)
>mm_chr1_136188491_136189179
Length = 689
Score = 507 bits (262), Expect = e-148
Identities = 280/286 (97%)
Strand = Plus / Plus
Query: 4 ccccccacccccaaaatgaaaccgtttgagagacatgagtgtcctgccctggacaagtgt 63
||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||
Sbjct: 204 ccccccacccccaaaatgaaaccgtttgagagacatgagtgccctgacctggacaagtgt 263
Query: 64 gcacatctgttctagtctcttcctgaagccagtggctgggctgggcctgccctgagttga 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gcacatctgttctagtctcttcctgaagccagtggctgggctgggcctgccctgagttga 323
Query: 124 gagagaagtgggaggagctatctggttccaaagcctctgggggccaagcatttgcagtgg 183
|||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 324 gagagaagggggaggagctatccggttccaaagcctctgggggccaagcatttgcagtgg 383
Query: 184 atattgggaaccttccagtgctttgtgtattgtttattgttttgtgtgttgtttgtaaag 243
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 atcttgggaaccttccagtgctttgtgtattgtttattgttttgtgtgttgtttgtaaag 443
Query: 244 ctgccatctgaccaaggtctcctgtgctgatgataccgggaacagg 289
||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ctgccgtctgaccaaggtctcctgtgctgatgataccgggaacagg 489
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
