Query= MSMg01no319_a10.b1 MSMg01no319_a10.b1 CHROMAT_FILE:
MSMg01no319_a10.b1 PHD_FILE: MSMg01no319_a10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:01:18 2005
(319 letters)
>mm_chr1_145759371_145760089
Length = 719
Score = 545 bits (282), Expect = e-159
Identities = 308/318 (96%), Gaps = 4/318 (1%)
Strand = Plus / Plus
Query: 4 ggaattcactccgta--tcccaagctggcctcgaactcacagagatgataaagttataca 61
|||||| |||||||| | || |||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaatttactccgtagtt--caggctggcctcgaactcacagagatgataaagttataca 261
Query: 62 ccactacaccattctcactataagcacatttaaaaattctcctggttttattttctggga 121
||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 262 ccactacaccaggctcattataagcacatttaaaaattctcctggttttcttttctggga 321
Query: 122 ttcttactttgtatctagtaccatgctatttatggtctggagcatttcagtaatttctta 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ttcttactttgtatctagtaccatgctatttatggtctggagcatttcagtaatttctta 381
Query: 182 attattacaaattttgtttacgagctctagaaagacaaatggatgaggaatctgaggcag 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 attattacaaattttgtttacgagctctagaaagacaaatggatgaggaatctgaggcag 441
Query: 242 agtgaagcaacggcttcctgtgccctgcagagtaacatttacactccttgcagggaattt 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 agtgaagcaacggcttcctgtgccctgcagagtaacatttacactccttgcagggaattt 501
Query: 302 agaaaccctcccatatgc 319
||||||||||||||||||
Sbjct: 502 agaaaccctcccatatgc 519
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no319_a10.g1 MSMg01no319_a10.g1 CHROMAT_FILE:
MSMg01no319_a10.g1 PHD_FILE: MSMg01no319_a10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:01:18 2005
(235 letters)
>mm_chr1_145943182_145943816
Length = 635
Score = 393 bits (203), Expect = e-114
Identities = 227/235 (96%), Gaps = 1/235 (0%)
Strand = Plus / Minus
Query: 1 tggaagtataaacattgaatgttcgaggctattctaggctattgtaggttttagactggt 60
|||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||| |
Sbjct: 560 tggaagtataaacattgaattttcgaggctattctagtctattgtaggtttcagactgct 501
Query: 61 cgtgactacacaataggactgtatgccattttaaataaacaaacaaacaaataaataaat 120
||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||
Sbjct: 500 cgtgactacacaataggactgtacgccattttaaataaacaaacaaacaaa-aaataaat 442
Query: 121 aaacaacaccattgaaatatatgagcacagagaaattctagaatagaagtttctcctaat 180
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 441 aaacaacaccattgaaatatatgagcacagacaaattctagaatagaagtttctcctaat 382
Query: 181 atctcctaagtagctagagacctctgtattctagcaggtaccagagaagtggatt 235
||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atctcctaagtggctagagacctctgtattctagcaggtaccagagaagtggatt 327
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 235
Length of database: 635
Length adjustment: 9
Effective length of query: 226
Effective length of database: 626
Effective search space: 141476
Effective search space used: 141476
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
