Query= MSMg01no321_o14.b1 MSMg01no321_o14.b1 CHROMAT_FILE:
MSMg01no321_o14.b1 PHD_FILE: MSMg01no321_o14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:04:45 2005
(298 letters)
>mm_chr1_58452205_58452902
Length = 698
Score = 545 bits (282), Expect = e-160
Identities = 293/298 (98%), Gaps = 3/298 (1%)
Strand = Plus / Plus
Query: 1 ctgacgccccctcctggtgtatctcaagtcagctacagtgtacttacatataataaataa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ctgacgccccctcctggtgtatctcaagtcagctacagtgtacttacatataataaataa 263
Query: 61 atctttaaaagaaaataataaggaaactattctctgagtttgtagattcctagcactatc 120
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 atctttaaaagaa---aataaggaaactattctctgagtttgtagattcctagcactatc 320
Query: 121 ttgataaaattgtataacttttattcttagcatctgggagatatcacttaaatccagata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgataaaattgtataacttttattcttagcatctgggagatatcacttaaatccagata 380
Query: 181 aagtggtgtggcatccgcctgtaatccagcactcatactacagaggcagaagagttgcca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagtggtgtggcatccgcctgtaatccagcactcatactacagaggcagaagagttgcca 440
Query: 241 atgttaattggaccatcctaggatgcaaaaaccagtctttgagtacctcccccaataa 298
||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 441 atgttaactggaccatcctaggatgcaaaaaccagtctttgagtgcctcccccaataa 498
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 298
Length of database: 698
Length adjustment: 9
Effective length of query: 289
Effective length of database: 689
Effective search space: 199121
Effective search space used: 199121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no321_o14.g1 MSMg01no321_o14.g1 CHROMAT_FILE:
MSMg01no321_o14.g1 PHD_FILE: MSMg01no321_o14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:04:45 2005
(343 letters)
>mm_chr1_58615301_58616045
Length = 745
Score = 627 bits (324), Expect = 0.0
Identities = 337/342 (98%), Gaps = 2/342 (0%)
Strand = Plus / Minus
Query: 1 taagttagag--tttttttgtggaattttaaattagaaatttagttgggggtggtaataa 58
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 taagttagaggttttttttgtggaattttaaattagaaatttagttgggggtggtaataa 483
Query: 59 gagagtgcagcatggggaactaagatcaaggttcatcatatacatatatggaaatgtcgt 118
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 482 gagagtgcagcatggggaactaggatcaaggttcatcatatacatatatggaaatgtcat 423
Query: 119 aatagaaccattgtttgtacaagtaatacacattactacttttaaaatttagtgcggaat 178
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 422 aatagaaccattgtttgtacaagtaatacacattactacttttaaaatctagtgcggaat 363
Query: 179 tcaacaaacatagaaagggcatctttttagtaagagagtgtttcagttatttcatagaca 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tcaacaaacatagaaagggcatctttttagtaagagagtgtttcagttatttcatagaca 303
Query: 239 atcctgcttcttcaggttctattttcatttgtcttggtttttttccttattctttccttt 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 atcctgcttcttcaggttctattttcatttgtcttggtttttttccttattctttccttt 243
Query: 299 tgaatgacaaagaagattgaaatacagtgtatcttattttta 340
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tgaatgacaaagaagattgaaatacagtgtatcttattttta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 745
Length adjustment: 9
Effective length of query: 334
Effective length of database: 736
Effective search space: 245824
Effective search space used: 245824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|