TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGCATGAGGTGCGGCGGA
ATTCCTACTTCTAGCAAAAAATAAGTTATTAAGTAAAAAAAAAAAATTTC
TACAGAAGAAAGAAATTTGAAACGCAGGTAACTTTATGTAACCTGATATT
ATGCCCAAAGGAATCTCATGGAAGCAAACATGTAAAGGTTTTGGGTAAAT
CTACTTTCTGTAATGTAAATCTGACTCATGATTTCTTACACGCGTTCTCT
TTACCGGCCAGGAAAGAACACAACAAACCAGAATCTTCTGCGGCAAAACT
TTATTGCTTACATCTTTAGGTGCTAGTAGCGCAAGCCCCCAGCCCCAAAA
ACGAAAGCGTTTTTTTCTTACCCCCCTACCACCCAGAGCGCCAGCGCGCC
AGAGCGAAAGCGCAAGAACCGCAAGTAAGAGAGCTATTGTTTACATCTTT
TAGAGCAAGCGCGCCAGAGCGCAAGCAAGAGAGGAGAATGGCGGAAACCC
CGTCCCCTTTAAGGAGGAGTTATCCTTCGCTTAGGACGCATCACTCCCTG
ATTGGCTGCAGCCCATGGCCGAGCTGACGTCACGGGAAAGGCAGAGTACA
AGTAGTGGTAAAATACCCTTGGCACATGCGCAGATTATTTGTTTACCACT
TTTTCACAGGATGTCAGCGCCATCTTGTGACGGTGAATGTGGGGGCGGCT
CCCAACATCTCCCCCTTTTCTTTTAATAG

CCATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXATTCATGTACAACTACCCACTGG
TGAACTTCTCATATGAACACCTTTTTTCTACATATTTCATCATATCAACA
GCATCAGATCACCTGGGTTTTGTCCTCAGAGAAAGAAGATAATTAATTTT
GTGAAAATATTTTACTTTTGATCTTTATAATAAAGATCTTTTCATTCTTT
ATTATAAAGAAAAACAAGTTCTGAAATTAGTACACAAATAAGACATTTCA
ACCTTTTCTTACCCAAACTAAAATGTACCTGTGAATCTTTCTATGGCTTT
TCAATTTTTGTTTCCTTGGATTCGTCCCCCTGTAATTAAGGAGTAGTCAT
AAAGTAGTTATTCAAATCTCATGGCAATAGTTCCATAAATGAGTGTAGGA
ACCATGAGTTTAAATGAGTTAATCAGAAATATTATGAGTACTTTATGTTA
TTTTCTGCGTTTTTATGAGTACGTACTTAACTTTAGTGGGAGAACTGCAT
TAAATATAGAATACACCATAATAATCTAAACCCTCTCAGTAGATTGTTTC
TCTCTCACATAAAAATTTTACATAATGTACTTTTATAGATTTATTGTCCA
GTAAAAGAAATGAAATATTGGTGATTCACATAGGANAGATAATTTTAAAT
GTACTTATTAATTATTGTATATAAAATAGCCTTTTA

Query= MSMg01no322_d15.g1 MSMg01no322_d15.g1 CHROMAT_FILE:
MSMg01no322_d15.g1 PHD_FILE: MSMg01no322_d15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:05:09 2005
         (659 letters)



>mm_chr1_113442834_113443892
          Length = 1059

 Score = 1199 bits (620), Expect = 0.0
 Identities = 649/659 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   attcatgtacaactacccactggtgaacttctcatatgaacaccttttttctacatattt 60
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attcatgtacaacaacccactggtgaacttctcatatgaacaccttttttctacatattt 260

                                                                       
Query: 61  catcatatcaacagcatcagatcacctgggttttgtcctcagagaaagaagataattaat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catcatatcaacagcatcagatcacctgggttttgtcctcagagaaagaagataattaat 320

                                                                       
Query: 121 tttgtgaaaatattttacttttgatctttataataaagatcttttcattctttattataa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttgtgaaaatattttacttttgatctttataataaagatcttttcattctttattataa 380

                                                                       
Query: 181 agaaaaacaagttctgaaattagtacacaaataagacatttcaaccttttcttacccaaa 240
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 381 agaaaaacaagttctgaaattagtacacaaataagatatttcaaccttttcttacccaaa 440

                                                                       
Query: 241 ctaaaatgtacctgtgaatctttctatggcttttcaatttttgtttccttggattcgtcc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctaaaatgtacctgtgaatctttctatggcttttcaatttttgtttccttggattcgtcc 500

                                                                       
Query: 301 ccctgtaattaaggagtagtcataaagtagttattcaaatctcatggcaatagttccata 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ccctgtaattaaggagtagtcataaagtagttattcaaatctcatggcaatagttccata 560

                                                                       
Query: 361 aatgagtgtaggaaccatgagtttaaatgagttaatcagaaatattatgagtactttatg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aatgagtgtaggaaccatgagtttaaatgagttaatcagaaatattatgagtactttatg 620

                                                                       
Query: 421 ttattttctgcgtttttatgagtacgtacttaactttagtgggagaactgcattaaatat 480
           |||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||
Sbjct: 621 ttattttctgcgtttttatgagtatgtatttaactttagtgggagaactgaattaaatat 680

                                                                       
Query: 481 agaatacaccataataatctaaaccctctcagtagattgtttctctctcacataaaaatt 540
           ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |||
Sbjct: 681 agaattcaccataataatctaaaccctctcagttgattgtttctctctcacataaacatt 740

                                                                       
Query: 541 ttacataatgtacttttatagatttattgtccagtaaaagaaatgaaatattggtgattc 600
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 741 ttacataatgtacttttatagatttattgttcagtaaaagaaatgaaatattggtgattc 800

                                                                      
Query: 601 acatagganagataattttaaatgtacttattaattattgtatataaaatagcctttta 659
           |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 acataggaaagataattttaaatgtacttattaattattgtatataaaatagcctttta 859


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 659
Length of database: 1059
Length adjustment: 10
Effective length of query: 649
Effective length of database: 1049
Effective search space:   680801
Effective search space used:   680801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)