CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCGAGAATCCGCGGA
ATTCAGTGGAAGTCACTCACAAAAGATTAAGTGTGAGGATAAATGAGTAG
CCCTAACTTCTTGTCTGACACTGCATAGAACTAGCTTTTTTTCTTATAAA
AATCTATGAACTAAACTAGGTGTGGTGTCACACACTTATGATGTCAGTAC
TGGGGAGACTGAGGCAGGAGGATTGCTAGTTAAGTGACAGCAGCCTAAGT
CACACAGAGAAACTCTCTTAAACAACTGAAAATGTGGACCCGAGTTGGCT
CAGTAGGTAAAGGTGCTTGCTAAAACCTGACAATGTGAGCTTGACCCCAG
GCTCCCGTAAGTGTCCCCAGACCTCTGGTGCAGATGCATCCAAACCCACC
CAGAATAAGTGGAATAAAAACTAAAATAAAAACCCCAAATCTATGAAATG
AAGATACATGTGTGTGATTTCTTCCATAAACAGTGGGGACAGCGCTGCCA
ACAATGGGTCACGTTCTTTTTAATAAGAAAACCCAGCAATGCCTCAGCTA
TTAGGCTATTGCTTAGCAAAATTATTCTTGGGTTTGAAAAGAGCTTTTCA
AGTCTAGAAAGTTTCATTTCCACATGCCTCTATACCTATGAGCTCAAACG
CTGGAGCCGATTTTCCTTCTCTCAGAGTTAAACTTCATTTCATTACATAA
GACGGAGCTATGTCTAAACGTAACAAGAGGCTGCCTGTGT

TGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXTCCCGAAATACAGATGCCCATAAATGGTGTTAAAAAAAA
AAGTACTCACCTAATACATCAAGCTCAGGCATCTACACACAAGCAGATGT
GTACATGGCAGACACACACATACATACACACACATACACACACACACACA
CAGTTTAAGCCAGCAAGGTGAGTGTGTAGTGACTGGCAGTCTTCCTATCT
TCATTGTCAACTTGACTGGATTTCATCACCATGGAAACATATCTGAGAAT
ACCTATAAGGGTGTTTCCAGATTTTTTCTAAATGAAGGGGGGAAGGGCAG
GCTGAGCGGAAGCAGTTCTATGTGGCGGGCTGGGGTCACAGACTGAATAA
AAAGACGAAGGGGCACTGACCACCACCATTCATCTCTTCTGTGCCCTGAT
GCTGGACACAACACAATTAGCTGCCTTACATTTCTGGCACCATGTCTTCC
CTACCAAGATGTCCTTTACCCTTAAACCCCAAGCCAAAATAAACCATGAA
AAAAAGATTCAAGATGCAAAAGACACGTGTCTACCCATATAAGGACTTTT
TTATGCTACCAGGCTACAAACTGAATGGTATCACTTATGAATTTATAAGG
ACATGTCGCCCTGGAGACTTTATTATAGAAATTATGCATAAGGCTCTTTC
ATGGCCCCTAAGTGTGATACAGAGACTTCAGCTTGACAAT

Query= MSMg01no325_b20.b1 MSMg01no325_b20.b1 CHROMAT_FILE:
MSMg01no325_b20.b1 PHD_FILE: MSMg01no325_b20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:09:35 2005
         (696 letters)



>mm_chr1_181543077_181544172
          Length = 1096

 Score = 1116 bits (577), Expect = 0.0
 Identities = 586/589 (99%)
 Strand = Plus / Minus

                                                                        
Query: 108  atctatgaactaaactaggtgtggtgtcacacacttatgatgtcagtactggggagactg 167
            ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1096 atctatgaactaaaccaggtgtggtgttacacacttatgatgtcagtactggggagactg 1037

                                                                        
Query: 168  aggcaggaggattgctagttaagtgacagcagcctaagtcacacagagaaactctcttaa 227
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1036 aggcaggaggattgctagttaagtgacagcagcctaagtcacacagagaaactctcttaa 977

                                                                        
Query: 228  acaactgaaaatgtggacccgagttggctcagtaggtaaaggtgcttgctaaaacctgac 287
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 976  acaactgaaaatgtggacccgagttggctcagtaggtaaaggtgcttgctaaaacctgac 917

                                                                        
Query: 288  aatgtgagcttgaccccaggctcccgtaagtgtccccagacctctggtgcagatgcatcc 347
            ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 916  aatgtgagcttgaccccaggctcccataagtgtccccagacctctggtgcagatgcatcc 857

                                                                        
Query: 348  aaacccacccagaataagtggaataaaaactaaaataaaaaccccaaatctatgaaatga 407
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 856  aaacccacccagaataagtggaataaaaactaaaataaaaaccccaaatctatgaaatga 797

                                                                        
Query: 408  agatacatgtgtgtgatttcttccataaacagtggggacagcgctgccaacaatgggtca 467
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796  agatacatgtgtgtgatttcttccataaacagtggggacagcgctgccaacaatgggtca 737

                                                                        
Query: 468  cgttctttttaataagaaaacccagcaatgcctcagctattaggctattgcttagcaaaa 527
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736  cgttctttttaataagaaaacccagcaatgcctcagctattaggctattgcttagcaaaa 677

                                                                        
Query: 528  ttattcttgggtttgaaaagagcttttcaagtctagaaagtttcatttccacatgcctct 587
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676  ttattcttgggtttgaaaagagcttttcaagtctagaaagtttcatttccacatgcctct 617

                                                                        
Query: 588  atacctatgagctcaaacgctggagccgattttccttctctcagagttaaacttcatttc 647
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616  atacctatgagctcaaacgctggagccgattttccttctctcagagttaaacttcatttc 557

                                                             
Query: 648  attacataagacggagctatgtctaaacgtaacaagaggctgcctgtgt 696
            |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556  attacataagacggagctatgtctaaacgtaacaagaggctgcctgtgt 508


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 696
Length of database: 1096
Length adjustment: 10
Effective length of query: 686
Effective length of database: 1086
Effective search space:   744996
Effective search space used:   744996
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)