Query= MSMg01no325_c09.b1 MSMg01no325_c09.b1 CHROMAT_FILE:
MSMg01no325_c09.b1 PHD_FILE: MSMg01no325_c09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:09:37 2005
(357 letters)
>mm_chr1_13049080_13049836
Length = 757
Score = 617 bits (319), Expect = 0.0
Identities = 346/355 (97%), Gaps = 2/355 (0%)
Strand = Plus / Plus
Query: 4 gaattctgcaaagtc-cccaagaggcaggcagagttctctgagttacagatctacccaat 62
||||||||||||| | | |||||||||||||||| |||||||||||||||||||||||||
Sbjct: 204 gaattctgcaaag-cactcaagaggcaggcagagatctctgagttacagatctacccaat 262
Query: 63 ctgcatagtgagtcctaagccgaagctacatagtctcaaaagaaaagttgtttttgtttt 122
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 263 ctgcatagtgagtcctaagccgaagctacatagtctcaaaagagaagttgtttttgtttt 322
Query: 123 taatttttgttttgtttaaggcattgtgcacacagctaagattgatcttgaactcttggt 182
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 323 taatttttgttttgtttaaggcaatgtgcacacagctaagattgatcttgaactcttggt 382
Query: 183 ccttctccccccacctcccgagtgctgggatgacagggaggaaccgctgtacccagctct 242
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ccttctcccccaacctcccgagtgctgggatgacagggaggaaccgctgtacccagctct 442
Query: 243 cagtgtaaatttttattgaggatctgtgggctactaagcagtaaccatcaatataatctg 302
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 443 cagtgtaaatttttattgaggatctgtgggctacaaagcagtaaccatcaatataatttg 502
Query: 303 aaaaatgtaacaccctctgctattcagtaggtgtcgatgttctactgctgtgaag 357
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 aaaaatgtaacaccctctgctattcagtaggtgtcgatgttctactgctgtgaag 557
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 357
Length of database: 757
Length adjustment: 9
Effective length of query: 348
Effective length of database: 748
Effective search space: 260304
Effective search space used: 260304
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no325_c09.g1 MSMg01no325_c09.g1 CHROMAT_FILE:
MSMg01no325_c09.g1 PHD_FILE: MSMg01no325_c09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:09:37 2005
(343 letters)
>mm_chr1_13223594_13224336
Length = 743
Score = 607 bits (314), Expect = e-178
Identities = 317/318 (99%)
Strand = Plus / Minus
Query: 1 actatgctgttaactcgaaacaaagagactggaaaataggaactggttaaatatttatgg 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 318 actatgctgttaactcgaaacaaagaaactggaaaataggaactggttaaatatttatgg 259
Query: 61 tttactcgtatgagaaattatagagccattaaaagttattctttatttgcatggtggtgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 tttactcgtatgagaaattatagagccattaaaagttattctttatttgcatggtggtgc 199
Query: 121 cgtggtggcacatgcctttaattgaagcattcaagaagcagagccaggcagatctctgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 cgtggtggcacatgcctttaattgaagcattcaagaagcagagccaggcagatctctgtg 139
Query: 181 tttgaggccagcctggtctacagagtgagttccacaacagccagggctacacagagaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 tttgaggccagcctggtctacagagtgagttccacaacagccagggctacacagagaaat 79
Query: 241 tctgtctcaaaaccaaagaaaacaaatttaaacatttttaaaatgctcatacagataaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 tctgtctcaaaaccaaagaaaacaaatttaaacatttttaaaatgctcatacagataaaa 19
Query: 301 cttagtggcctaatattc 318
||||||||||||||||||
Sbjct: 18 cttagtggcctaatattc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 743
Length adjustment: 9
Effective length of query: 334
Effective length of database: 734
Effective search space: 245156
Effective search space used: 245156
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
