Query= MSMg01no325_e14.b1 MSMg01no325_e14.b1 CHROMAT_FILE:
MSMg01no325_e14.b1 PHD_FILE: MSMg01no325_e14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:09:46 2005
(516 letters)
>mm_chr1_160776361_160777271
Length = 911
Score = 861 bits (445), Expect = 0.0
Identities = 499/523 (95%), Gaps = 19/523 (3%)
Strand = Plus / Minus
Query: 1 gcaagctccccattacttgtaatttcccagtctctgatacaaatttgtcttgataatgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 gcaagctccccattacttgtaatttcccagtctctgatacaaatttgtcttgataatgtt 652
Query: 61 acatgtaaaattccaaattcaaatgataaacctaatttttttttaaaggagagacgggag 120
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 651 acatgtaaaattccaaattcaaatgataaacctaa-ttttttttaaaggagagacgggag 593
Query: 121 tcacacaaacagtacaggtgtgcatctctgctggggtagatctttgaccacagctttaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 tcacacaaacagtacaggtgtgcatctctgctggggtagatctttgaccacagctttaaa 533
Query: 181 actt-ggaagaaaatgtctagtttgagctccagtatagtcttctttccatggttgttctc 239
|||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 532 acttgggaagaaaatgtctagtttgagctccagtatag---tctttccatggttgttctc 476
Query: 240 ttatttaacatcagaaggttg---aaaaaaatggctaacaaagaaaagcaagcagaattc 296
|||||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||
Sbjct: 475 ttatttaacatcagaaagttgaaaaaaaaaatggctaacaaagaaaagcaagcagaactc 416
Query: 297 agatcatgaattagaaagaaaaattagcatgatttaattctgcattcaggcacccgacat 356
||||||||||||||||||||||| |||||||||||||||||||||||||||| | |
Sbjct: 415 agatcatgaattagaaagaaaaa-tagcatgatttaattctgcattcaggca---g---t 363
Query: 357 --attta-tttttaatgacatccacatataaatatttaaagccagtaatatcttgtttta 413
| ||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||
Sbjct: 362 tga-ttattttttaatgatatccacatataaatatttaaagccaataatatcttgtttta 304
Query: 414 tagataggacactaaggcttggcttacacttggtttcagagctaatagaaggacatccta 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 tagataggacactaaggcttggcttacacttggtttcagagctaatagaaggacatccta 244
Query: 474 ggattcaaactctatttccaactggtcataccatcctctttcc 516
|||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 243 ggattcaaactctatttccaactggtcataccattctctttcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 7
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 516
Length of database: 911
Length adjustment: 10
Effective length of query: 506
Effective length of database: 901
Effective search space: 455906
Effective search space used: 455906
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no325_e14.g1 MSMg01no325_e14.g1 CHROMAT_FILE:
MSMg01no325_e14.g1 PHD_FILE: MSMg01no325_e14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:09:47 2005
(246 letters)
>mm_chr1_160591331_160591976
Length = 646
Score = 441 bits (228), Expect = e-128
Identities = 240/244 (98%), Gaps = 2/244 (0%)
Strand = Plus / Plus
Query: 1 attctcgtttgcagctgaatagtctccttccctcctcttagaggcttcctgctgctgtgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attctcgtttgcagctgaatagtctccttccctcctcttagaggcttcctgctgctgtgt 260
Query: 61 gcaaccctagaacctcaccttttccttaggtccactcaaccctattgtggaatttggata 120
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 261 gcaaccctagaacctcaccttttccttaggtccgctcaaccctattgtggaatttggata 320
Query: 121 tttacacgaatctggtttgcttgtttattatctagctggaaaatttatgcaggcagggta 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 321 tttacacgaatctggtttgcttgtttattatctagctggaaaatttatgcaggcaggg-a 379
Query: 181 t-atatgtgtcttcttttgcgtcattgcatccttcatgcttagcacaggaaatggcccct 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ccatatgtgtcttcttttgcgtcattgcatccttcatgcttagcacaggaaatggcccct 439
Query: 240 tgta 243
||||
Sbjct: 440 tgta 443
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 646
Length adjustment: 9
Effective length of query: 237
Effective length of database: 637
Effective search space: 150969
Effective search space used: 150969
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
