Query= MSMg01no326_e01.b1 MSMg01no326_e01.b1 CHROMAT_FILE:
MSMg01no326_e01.b1 PHD_FILE: MSMg01no326_e01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:10:56 2005
(544 letters)
>mm_chr1_40742821_40743764
Length = 944
Score = 1013 bits (524), Expect = 0.0
Identities = 541/550 (98%), Gaps = 6/550 (1%)
Strand = Plus / Minus
Query: 1 tgaaaaatctactgccttcctttttcagactgaaaatatatgggtgaccctgaacatacg 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 572 tgaaaaatctactgccttcctttttcagactgaaaatatatgggtgaccctgaacatatg 513
Query: 61 tgttgctctcaagagaaaagaccctggaccgctttgtgggcattattaggtctgagcaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 tgttgctctcaagagaaaagaccctggaccgctttgtgggcattattaggtctgagcaca 453
Query: 121 cggtggcaggcacatgggatgtacaaaaggagatgcaaaggccatgaactccatcctgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 cggtggcaggcacatgggatgtacaaaaggagatgcaaaggccatgaactccatcctgtc 393
Query: 181 cctctctagataacacacgagcttgggaaaaactagacgaagcataaggcaagtgcaagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 cctctctagataacacacgagcttgggaaaaactagacgaagcataaggcaagtgcaagg 333
Query: 241 agacatatttttcagagacaaggatctctaaatccaagaacatacacaacttttgagact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 agacatatttttcagagacaaggatctctaaatccaagaacatacacaacttttgagact 273
Query: 301 catgttttaaactcaaggcagcctgaagcccagaacagacatcttcatgatccaaatggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 catgttttaaactcaaggcagcctgaagcccagaacagacatcttcatgatccaaatggt 213
Query: 361 ttgcctttcaaaaatagcaataataataattaataataataataata------gtaataa 414
|||||||||||||||||| |||||||||||||||||||||||||||| |||||||
Sbjct: 212 ttgcctttcaaaaatagcgataataataattaataataataataataataatagtaataa 153
Query: 415 tacaatgtgcccacccaggtaccaaaagcaaataaaacacccacagtgagaccccaatgc 474
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 tacaatgtgcccgcccaggtaccaaaagcaaataaaacacccacagtgagaccccaatgc 93
Query: 475 tgtacagggcatacaaggaatcctggaacaaagaccagagttcagttactttaaagatta 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92 tgtacagggcatacaaggaatcctggaacaaagaccagagttcagttactttaaagatta 33
Query: 535 gagacagtgc 544
||||||||||
Sbjct: 32 gagacagtgc 23
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 544
Length of database: 944
Length adjustment: 10
Effective length of query: 534
Effective length of database: 934
Effective search space: 498756
Effective search space used: 498756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no326_e01.g1 MSMg01no326_e01.g1 CHROMAT_FILE:
MSMg01no326_e01.g1 PHD_FILE: MSMg01no326_e01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:10:56 2005
(347 letters)
>mm_chr1_40634080_40634826
Length = 747
Score = 636 bits (329), Expect = 0.0
Identities = 341/345 (98%)
Strand = Plus / Plus
Query: 1 taagaactatatctataaacaggtgtgaaggtgttcttaagagaaaattgctcccctttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taagaactatatctataaacaggtgtgaaggtgttcttaagagaaaattgctcccctttc 260
Query: 61 ttcagctaccaataattggaacttccccacaagaagctcaaacttggagaagaaaatggc 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttcagctatcaataattggaacttccccacaagaagctcaaacttggagaagaaaatggc 320
Query: 121 taaatcctgcttccaggaagaggaagaacttgtttccaggaaagagatttcatacgccag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taaatcctgcttccaggaagaggaagaacttgtttccaggaaagagatttcatacgccag 380
Query: 181 ggcaccattatggagggcctagagtggagacaactgacatgggaagtatgggcaaaaata 240
||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggcactatcatggagggcctagagtggagacaactgacatgggaagtatgggcaaaaata 440
Query: 241 cccggatggggactgtttagtgatgcagctttctcgccctctgttaaaaccaaacatcac 300
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccctgatggggactgtttagtgatgcagctttctcgccctctgttaaaaccaaacatcac 500
Query: 301 atcagaacctcagaagatggatgtggtggatggggggcggggggg 345
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atcagaacctcagaagatggatgtggtggatggggggcggggggg 545
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 347
Length of database: 747
Length adjustment: 9
Effective length of query: 338
Effective length of database: 738
Effective search space: 249444
Effective search space used: 249444
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
