ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTACGAAATACGCGGAAT
TCATTTCTCTTTTTCTTATTAGATATTTTCTTCATTTACATTTCAAATGC
TATCCCAAAAATTCCCTACACCCTCCTCTGCCCTGCTCCCCTACCCACCC
ACTCCCACTTCTTGGCCCTGGCATTCCCTTGTACTGGGGCATATAAAGTT
TGGTAGACCAAGGGGTCTCTCTTCCCAATGATGGCCGACTAGGCCATCTT
CAGCTACATATGCAGCTAGAGACATGAGCTCTGAGGGTACTGGTTAGTTC
ATATTGTTGTTCCACCTTTAGGGTTGCAGACCCATTAAGCTCTTGGGTAC
TTTATATAGCTCCTTCATTGGGGGCCCTGTGTTCCATCCTATAGATGATT
GTGAGAATCCACTGATGCACCCACCACGCCCTGGCAAAGCCTCATAGGAG
ACAGCTATATCAGAGTCCTTTCAGCAAAACTTGCTGCCTTATGCAATACT
GTCTGCATTTGGTGGCTGATTACTGGATGGATCCCCAGGTGGGGCAGTCT
CTGGATGGTCCATTCTTTCGGGAGACCAGCAATCTTAACTGAACTAAACC
GCCAAAATTTCTTAGACACTCAGCCACCAACCAGGTATGATACATTAGCT
GATCTGAGGCCCCCATCATATATACAGCAAAGGACTTCCTGCTCTGGTGC
AGTGAAAGAAGTTGTACAGAACCCATGATG

ATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXACTGGGTAGCTGAGGATGGCTTTGTATTTC
TGATCCCTCTGACTGTTGGAAATGTAGGTATACACCACTGCTGTTAAATA
GTCTGTGCTTATTCATTATGCCTAAATTTTCTGTATATGAGGCAGGCATA
CATTTACAGACTTCCCACTGATTTATTATAAATTTGATTATTCTCAAAGA
TGCATGTTTAACGCTAGTTGTAATGGGTCTGCATGGGCTACTTTGCTCTT
AGCACAAGGAGTTGTCTCCAGTTTCACTTCCTGCAGGTTCTCTTTGTCTG
ATTTGTTGAGGTTTCCCTGGAATCAGCACCAAGTAGGGACCAATGTTGAA
TATCAATGAGTCTCAACACCACCAACCCTTAGGAATACTCATATTCACAT
AAACAATTTTATGAGAAATATGCTTAAGCTAAAAATATCTCTTAAAGTCC
TGTAGCTCCCTCTTCCAGCACTGTTTCAGTCCAAGCTCTAGAAATATAAT
TTAACTGGACTCATAGATTCCAATCCATTGTTAGTTTGGGTAGAATTTCT
GTCATTATAAATTATATTTTTCATCAAAATATTCACCCATCAACCAGTCC
ACCTAATTCATCTATTTATTAATTGTGATAAGACTTAGCCTATGTTCAAA
AATAAGAGCACCACAATAATGTGGCAAA

Query= MSMg01no327_b05.g1 MSMg01no327_b05.g1 CHROMAT_FILE:
MSMg01no327_b05.g1 PHD_FILE: MSMg01no327_b05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:11:54 2005
         (604 letters)



>mm_chr1_119434729_119435732
          Length = 1004

 Score = 1083 bits (560), Expect = 0.0
 Identities = 593/604 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   actgggtagctgaggatggctttgtatttctgatccctctgactgttggaaatgtaggta 60
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 201 actgggtagctgaggatggctttgtatttctgatccccctgactgttggaaatgtaggta 260

                                                                       
Query: 61  tacaccactgctgttaaatagtctgtgcttattcattatgcctaaattttctgtatatga 120
           |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 261 tacaccactgatgttaaatagtctgtgcttattcattatgcctaaattttgtgtatatga 320

                                                                       
Query: 121 ggcaggcatacatttacagacttcccactgatttattataaatttgattattctcaaaga 180
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggcaggcatacatttacagactgcccactgatttattataaatttgattattctcaaaga 380

                                                                       
Query: 181 tgcatgtttaacgctagttgtaatgggtctgcatgggctactttgctcttagcacaagga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgcatgtttaacgctagttgtaatgggtctgcatgggctactttgctcttagcacaagga 440

                                                                       
Query: 241 gttgtctccagtttcacttcctgcaggttctctttgtctgatttgttgaggtttccctgg 300
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 attgtctccagtttcacttcctgcaggttctctttgtctgatttgttgaggtttccctgg 500

                                                                       
Query: 301 aatcagcaccaagtagggaccaatgttgaatatcaatgagtctcaacaccaccaaccctt 360
           |||||||||||||||||||||||||||||||||||||||||||||| | ||  || ||||
Sbjct: 501 aatcagcaccaagtagggaccaatgttgaatatcaatgagtctcaagagcattaagcctt 560

                                                                       
Query: 361 aggaatactcatattcacataaacaattttatgagaaatatgcttaagctaaaaatatct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aggaatactcatattcacataaacaattttatgagaaatatgcttaagctaaaaatatct 620

                                                                       
Query: 421 cttaaagtcctgtagctccctcttccagcactgtttcagtccaagctctagaaatataat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cttaaagtcctgtagctccctcttccagcactgtttcagtccaagctctagaaatataat 680

                                                                       
Query: 481 ttaactggactcatagattccaatccattgttagtttgggtagaatttctgtcattataa 540
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 681 ttaactggactcatagattccaatccattattagtttgggtagaatttctgtcattataa 740

                                                                       
Query: 541 attatatttttcatcaaaatattcacccatcaaccagtccacctaattcatctatttatt 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 attatatttttcatcaaaatattcacccatcaaccagtccacctaattcatctatttatt 800

               
Query: 601 aatt 604
           ||||
Sbjct: 801 aatt 804


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 604
Length of database: 1004
Length adjustment: 10
Effective length of query: 594
Effective length of database: 994
Effective search space:   590436
Effective search space used:   590436
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)