Query= MSMg01no327_l23.b1 MSMg01no327_l23.b1 CHROMAT_FILE:
MSMg01no327_l23.b1 PHD_FILE: MSMg01no327_l23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:12:42 2005
(664 letters)
>mm_chr1_129003908_129004971
Length = 1064
Score = 1197 bits (619), Expect = 0.0
Identities = 649/659 (98%), Gaps = 1/659 (0%)
Strand = Plus / Minus
Query: 6 gaattcaccacctcgtccacgcttaggcagtactgtggacagaacccaggggcttcatgc 65
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 966 gaattcaccacctcgtcca-gcttaggcagtactgtggacagaacccaggggcttcatgc 908
Query: 66 attctaggcaagtgctctaccaatggagctgtatccccaacccgctctttacttcctgtt 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 907 attctaggcaagtgctctaccaatggagctgtatccccaacccgctctttacttcctgtt 848
Query: 126 actacctgaatctgtagacttgttggctcgcccacttgtatccatgtcactaattttact 185
|||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||
Sbjct: 847 actacctgaatctgtagacttgttggcttgcccgcttgtatccatgtcactaattttact 788
Query: 186 ggcctctgtgacatacagtctcaccaatggcttgcctgtcattactaggttctatcatga 245
||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 787 ggcctctgtgacatagagtctcaccaatggcttgactgtcattactaggttctatcatga 728
Query: 246 tcagctgccaaaggatcatacttgcctgatcactgaattcttgtctttctgccctcagcc 305
||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 727 tcagctgccaaaggatcgtacttgcctgatcgctgaattcttgtctttctgccctcagcc 668
Query: 306 tccctttctctttctaccacatctctctactttctcttcctgactccttcaagagtgctc 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 tccctttctctttctaccacatctctctactttctcttcctgactccttcaagagtgctc 608
Query: 366 cttaaagatgttttctgaccactcaaatacaacagtttaaaatgcccaatggccagcttt 425
|||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||
Sbjct: 607 cttaaagatgttttctgagtactcaaatacaacagtttaaaatgcccgatggccagcttt 548
Query: 426 acttcctcagaataaagtgaaaacccttctccaagtttctcatagtccatccaagcccct 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 acttcctcagaataaagtgaaaacccttctccaagtttctcatagtccatccaagcccct 488
Query: 486 ccttccagtcacatgccaatcagtcttcatcgatgcttgacactggtgcagagcttccca 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 ccttccagtcacatgccaatcagtcttcatcgatgcttgacactggtgcagagcttccca 428
Query: 546 tgggacagttctagtcccatcctgttgccatgccactgggacctcagacagtgcagcgtt 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 tgggacagttctagtcccatcctgttgccatgccactgggacctcagacagtgcagcgtt 368
Query: 606 gccagacagctggagcgctgcggggaaggagcttggctgtcttccagtagccctgccag 664
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 gccagacagctggagcgctgcggggaaggagcttggctgtcttccagtagccctgccag 309
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1064
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1054
Effective search space: 689316
Effective search space used: 689316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no327_l23.g1 MSMg01no327_l23.g1 CHROMAT_FILE:
MSMg01no327_l23.g1 PHD_FILE: MSMg01no327_l23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:12:43 2005
(636 letters)
>mm_chr1_128935012_128936047
Length = 1036
Score = 1170 bits (605), Expect = 0.0
Identities = 629/637 (98%), Gaps = 1/637 (0%)
Strand = Plus / Plus
Query: 1 cacacccctaagccccttacccca-taaaaacccctagctttcgagcctcgtggccaaca 59
|||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||
Sbjct: 200 cacacccctaagccccttaccccattaaaaacccctagctttcgagccttgtggccaaca 259
Query: 60 tccattatctcctgtgtgggatgcatgtcggtctggagctccatcattaaacgacctcgt 119
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 260 tccgttatctcctgtgtgggatgcatgtcggtctggagctccatcattaaacgacctcat 319
Query: 120 gtaattacatcaagatggtccttcgtgattttttgggtgcacgccgaatcgggagttgag 179
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 320 gtaattacatcaagatggtccttcgtgattttttgggtgcacaccgaatcgggagttgag 379
Query: 180 tgggggtttccccactaggtctaacacaaacagatatgactcttcagttctagtgacttt 239
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 380 tgggggtttccccactaggtctgacacaaacagatatgactcttcagttctagtgacttt 439
Query: 240 ccctctcacataacttggggaagaacatgtcactattgataacattatctttaaagtatc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ccctctcacataacttggggaagaacatgtcactattgataacattatctttaaagtatc 499
Query: 300 tgctgctagttatctggccagactgactatgcaatgaaatagacagggacattccacaga 359
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tgctgctggttatctggccagactgactatgcaatgaaatagacagggacattccacaga 559
Query: 360 ggaaaataaaaatattattggaaacaacttcccatttctacctaaaagcaaaggacgcta 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ggaaaataaaaatattattggaaacaacttcccatttctacctaaaagcaaaggacgcta 619
Query: 420 tcatttatttaaaaatatatgtgcatcataatgacttcaatttgtaattataatttggag 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tcatttatttaaaaatatatgtgcatcataatgacttcaatttgtaattataatttggag 679
Query: 480 atagcatcatttttaagagatctttttattctatatgtatgaatgcttccccacatgtat 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 atagcatcatttttaagagatctttttattctatatgtatgaatgcttccccacatgtat 739
Query: 540 gtgtatagtgtgcaggtctggtgttctcagagaccagaagaaggtgtcagatcccctgga 599
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 740 gtgtatagtgtgcaggtctggtgttctcagaggccagaagaaggtgtcagatcccctgga 799
Query: 600 attgaaggtacagatgttggtgagcgttcatgtggat 636
|||||||||||||||||||||||||||||||||||||
Sbjct: 800 attgaaggtacagatgttggtgagcgttcatgtggat 836
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1036
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1026
Effective search space: 642276
Effective search space used: 642276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
