Query= MSMg01no328_e15.b1 MSMg01no328_e15.b1 CHROMAT_FILE:
MSMg01no328_e15.b1 PHD_FILE: MSMg01no328_e15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:13:24 2005
(371 letters)
>mm_chr1_134700728_134701499
Length = 772
Score = 646 bits (334), Expect = 0.0
Identities = 358/366 (97%), Gaps = 1/366 (0%)
Strand = Plus / Plus
Query: 7 attcccattgattagccaaagccccttagagataccacagaggcagatgccaccatctgt 66
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 attcccattgatgaggcaaagccccttagagataccacagaggcagatgccaccatctgt 266
Query: 67 cacaggagtggcctgggcccccaagcgtggcagggaggggaccctgcaggcttggtttcc 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 cacaggagtggcctgggcccccaagcgtggcagggaggggaccctgcaggcttggtttcc 326
Query: 127 agaaaggtctccagttggatattgccctagtatctcccttgagcttagtctctgtcttca 186
|||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct: 327 agaaaggtctccagttggatgttgccctggtatctcccttgagcttagtctctgtcttca 386
Query: 187 ttagagagccagccctgtgcttagcaaccctgcctatgtggagtaatgacaggttgttca 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 ttagagagccagccctgtgcttagcaaccctgcctatgtggagtaatgacaggttgttca 446
Query: 247 gtcagtgtaaccagggg-tagaattccaggctaacaccccactcctccagtgtggacctc 305
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 atcagtgtaaccagggggtagaattccaggctaacaccccactcctccagtgtggacctc 506
Query: 306 tgagatgctgtagggatgagaggtgagggaggaaacgctgggaaagtagcacatttccct 365
||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 507 tgagatgctgtagggatgagaggtgagggaggaaatgctggaaaagtagcacatttccct 566
Query: 366 tttgga 371
||||||
Sbjct: 567 tttgga 572
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 371
Length of database: 772
Length adjustment: 9
Effective length of query: 362
Effective length of database: 763
Effective search space: 276206
Effective search space used: 276206
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no328_e15.g1 MSMg01no328_e15.g1 CHROMAT_FILE:
MSMg01no328_e15.g1 PHD_FILE: MSMg01no328_e15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:13:24 2005
(278 letters)
>mm_chr1_134816640_134817317
Length = 678
Score = 414 bits (214), Expect = e-120
Identities = 243/264 (92%), Gaps = 18/264 (6%)
Strand = Plus / Minus
Query: 1 ttctccccagtgcctgggccctactgcaaagggaaagaattacccttctctgagtctcct 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 ttctccccagtgcttgggccctactgcaaagggaaagaattacccttctctgagtctcct 342
Query: 61 ggacctttcatcatggatttaggccatgcagccacctggttctacacttgtatatacaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 ggacctttcatcatggatttaggccatgcagccacctggttctacacttgtatatacaca 282
Query: 121 agggcaacctcttggactccgtttctcaggtctagaatgggggaagtgatatatgaagtg 180
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 agggcaacctcttggactctgtttctcaggtctagaatgggggaagtgatatatgaagtg 222
Query: 181 gatgtagccaagttagcaaagttctcttccaggcacttgccaatagccgttctttttctt 240
|||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 221 gatgtagccaagttagcaaa------------------gccaatagccgttctttttctt 180
Query: 241 ttcctttttccttttttttttttt 264
||| ||||||||||||||||||||
Sbjct: 179 ttcttttttccttttttttttttt 156
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 278
Length of database: 678
Length adjustment: 9
Effective length of query: 269
Effective length of database: 669
Effective search space: 179961
Effective search space used: 179961
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
