CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCACACAGATCCGCGG
AATTCATTTCTTTACAAAGAGAAATATAACCNTTTTGATACTTGAAGAAG
GTATAAAGATATAGTGCTCTAATAAGTATTATGGGATACTCATATTTTTG
TCTGATGTGGGCTTCATGGGAATTTTGGGTTTAAATCCTGATTTGACAAA
ATGCCTCTTATACGTAGGCGTAGTACCTAAGGATGGAAATTATCGCATCC
ACCCCTACCAGCAGGAAAGATGCAATACCACGTTGTCCTTCTTCAAGCAG
GTTTATTCAGGAACACTTCGCATTGCTATGCAGAAACAGGAATCTCCTGA
ACAACCCCAGGATGGGCCTTCCTACTGACTCCTCCCAATCAGCCCAGTCA
TGTAACGGCAGTCCATACGCCCGCAGCAAGTGACAACACCTCAGGCGAGC
TGACGAGACATGGCATCTGTGCAGTGCAGGCAACTGGAATGTGGCTAAGT
CTGATATAATGAGGAAGTCAGGCGCACGTCATATGATCCGCCAGTTATCC
CGGGTACCATCTTGTGGCTAGCGTCTGTTTCCTTTCCTCCCATCTTCTCC
TCTTTTATTATCTCGGTCACGAGACTGCCTATCTTACGCCGTCCCCTTCT
TAATGCTTCTTACCCGTCTTCAGGGATTAAGACCTCACTGTGCATGCACC
CTGTTTTTATTTTTATATTTTCTTT

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCAGATCTAGCACACAGTAGCTTTG
AGAATGATAACTCCAGTCACCTCATGGGAAAAAGACCAGTTTCCAGGAAC
TAAAATGTTTATTTCTTCAAGGACTTGTCCCTAGCACCAGAATGGGCTTT
GCCAAGTCTGCCTGAGGTCACAGACATAGAACTAGTTTCTTCTTTGTCCT
TTCATCAGGGTCTCTGAAAAAGTTGGATTGATCTGTCTCTCAACATCTAG
ATCCCCTAGAACTAGAATTAGAATCAGTTATGAGGTGCTCTGTGATTTCT
TGGAACTGCAACGGGGTGCTCTGTAAGAGGAGCAAGTGTTCTTAACCTCC
GACTCATCTCTCTAGCTCCCTGTATGTACTAATTTGAAAAATATGACAAG
GTTTAATAATATTTCCTTCTTTTGCCTTCATCTGACTTAGGATATTAGTT
CCTGTTTTGAGGTTTTTCATCCATTTGAAATTGAGTTTAGCTTAATATGA
AAGCTTAGGTTTAAGTATTATTTTTCTACCTGTACCCATCCAGTTAGATT
AATAGTATTTATTGATCATGACTCTTCTCCACGGTATATTAATGAATTCT
TTGTAAATCCACTTCCTACCTACACCGTATGAATACCTCCGCGACGTTGC
CAGAGCTCATGCTCATATTG

Query= MSMg01no328_f07.g1 MSMg01no328_f07.g1 CHROMAT_FILE:
MSMg01no328_f07.g1 PHD_FILE: MSMg01no328_f07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:13:27 2005
         (513 letters)



>mm_chr1_106136599_106137511
          Length = 913

 Score =  961 bits (497), Expect = 0.0
 Identities = 509/513 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   cagatctagcacacagtagctttgagaatgataactccagtcacctcatgggaaaaagac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagatctagcacacagtagctttgagaatgataactccagtcacctcatgggaaaaagac 260

                                                                       
Query: 61  cagtttccaggaactaaaatgtttatttcttcaaggacttgtccctagcaccagaatggg 120
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 261 cagtttccaggaactaaaatgtttgtttcttcaaggacttgtccctagcaccagaatggg 320

                                                                       
Query: 121 ctttgccaagtctgcctgaggtcacagacatagaactagtttcttctttgtcctttcatc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctttgccaagtctgcctgaggtcacagacatagaactagtttcttctttgtcctttcatc 380

                                                                       
Query: 181 agggtctctgaaaaagttggattgatctgtctctcaacatctagatcccctagaactaga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agggtctctgaaaaagttggattgatctgtctctcaacatctagatcccctagaactaga 440

                                                                       
Query: 241 attagaatcagttatgaggtgctctgtgatttcttggaactgcaacggggtgctctgtaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 attagaatcagttatgaggtgctctgtgatttcttggaactgcaacggggtgctctgtaa 500

                                                                       
Query: 301 gaggagcaagtgttcttaacctccgactcatctctctagctccctgtatgtactaatttg 360
           ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||
Sbjct: 501 gaggagcaagtgttcttaacctctgactcatctctctagctccctctatgtactaatttg 560

                                                                       
Query: 361 aaaaatatgacaaggtttaataatatttccttcttttgccttcatctgacttaggatatt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaaaatatgacaaggtttaataatatttccttcttttgccttcatctgacttaggatatt 620

                                                                       
Query: 421 agttcctgttttgaggtttttcatccatttgaaattgagtttagcttaatatgaaagctt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agttcctgttttgaggtttttcatccatttgaaattgagtttagcttaatatgaaagctt 680

                                            
Query: 481 aggtttaagtattatttttctacctgtacccat 513
           ||||||||||||||||||||||| |||||||||
Sbjct: 681 aggtttaagtattatttttctacatgtacccat 713


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 513
Length of database: 913
Length adjustment: 10
Effective length of query: 503
Effective length of database: 903
Effective search space:   454209
Effective search space used:   454209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)