CTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCGAAGATCCGCG
GAATTCCACCAACAATGCCCGAGTGTTCCTCTTTCTCCACATCCTTGCCA
GCATCTGCTGTCACCTGAATTTTTGATCTTAGACATTCTGGCTGGTGTGA
AGTGGAATCTCAGGGTTGTTTTGATTTGCATTTCTCTGATGATTAAGGAT
GCTGAACATTTTTTTCAGGTGCTTCTCTGCCATTCGGTATTCCTCAGGTG
AGAATTCTTTGTTTAGCTCTGAGCCCCATTTTTTAATGGGGTTATTTGAT
TTTCTGGAGTCCACCTTCTTGAGTTCTTTATATATATTAGATATTAGCCC
CCTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGGTGGAGGCC
TTTTTGACTCTTTGACAGGGCCCCCTGCCATACAGAATCTTTGCAATTTT
ATGATGTCCCATTTGTCAATTCTTGACCTTACAACACAAATCACTGCTGT
TCTATTCACGAATTTTTTCCCTCGGAACCATATCTTTTAATATTTTCCCC
TTTTTCTCTTACTATAAGTTAAATTGTCATCTGTATTAATTGTCGATTTT
CCATTTCTTTCCTTTTTTTTTCTTTCATTTTATTTTTTTTCAACTTCTGT
TTCTTCTCCCTGATTATCCTTCTTTTTCACTCTAACATTTTGGATNCTCT
CAACTTTTCTTAATTATTCCTACTACTTATTCTTTTTTTTCATCTTTTTT
TGCCCTTT

ACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTGTGGGCAGACAGGTGTGAGTAAG
GGTAATAGTGAGAAGAAGAATGTGAAAGGAGTGTTATCTGAAGGAAAACA
CGAAAATACCATGATGAAATCAGTGAATTTTATGTTAATTTAAAGGTAAC
TTAAACTGTAAGAGGTCTGGGGAGAAGACTCAATAGGAAGGAGTGCTAGT
TGCACAGCATGAGATCCTGTGTACAAATTTCCAGCACCAACATACAAAAT
CAGGTACGTCTGCATGCATCTCTACCTCCAATGCTTGGCATAAGGGCATA
GATAAAAGAATCGTTGTGCATGCCGAACTTCTTGAATTGGGTAGTTTCAT
ACCACTGAGAGACCCTGTCTCACACCAAAATGTTGCTTGCACCTGATCAG
CAATACTTCAGGCTCTCCTCTGACATCTACACATACCTTTACATATGTGA
GCACACTCCACATGTAAAAGCACATATGCATAAATACACACAAGCAAATA
AATAATTCCAGTCCAGTGGTAGAGGTTACAAGAGATTGAAAACTGACTGG
TCCCAGAGGCAGCTTAAGGTGGTGTGAAGTGAGGAAATGAAATAATGGAT
GTCATGAATGAGGATGACAATTACTTCTGTATTTATCTGTGAAAGTGTCT
CCAAAACCGACAACATTTTGAATATATTACCTGATAAN

Query= MSMg01no329_i05.g1 MSMg01no329_i05.g1 CHROMAT_FILE:
MSMg01no329_i05.g1 PHD_FILE: MSMg01no329_i05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:14:59 2005
         (464 letters)



>mm_chr1_102949382_102950245
          Length = 864

 Score =  681 bits (352), Expect = 0.0
 Identities = 421/464 (90%), Gaps = 31/464 (6%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgtgggcagacaggtgtgagtaagggtaatagtgagaagaagaatgtgaaaggagtgtta 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 201 tgtgggcagacaggtgtgagtaagggtaatagtgagaagaagaatgtgaaaggaatttta 260

                                                                       
Query: 61  tctgaaggaaaacacgaaaataccatgatgaaatcagtgaattttatgttaatttaaagg 120
           |||||||||||||| |||||||||||||| |||||||||||||||               
Sbjct: 261 tctgaaggaaaacatgaaaataccatgataaaatcagtgaatttt--------------- 305

                                                                       
Query: 121 taacttaaactgtaagaggtctggggagaagactcaataggaaggagtgctagttgcaca 180
                           ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 306 ----------------aggtctgggaagaagactcaataggaaggagtgctagttgcaca 349

                                                                       
Query: 181 gcatgagatcctgtgtacaaatttccagcaccaacatacaaaatcaggtacgtctgcatg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 350 gcatgagatcctgtgtacaaatttccagcaccaacatacaaaatcaggtacatctgcatg 409

                                                                       
Query: 241 catctctacctccaatgcttggcataagggcatagataaaagaatcgttgtgcatgccga 300
           || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 410 cacctctacctccaatgcttggcataagggcatagataaaagaatcattgtgcatgccaa 469

                                                                       
Query: 301 acttcttgaattgggtagtttcataccactgagagaccctgtctcacaccaaaatgttgc 360
           |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 470 acttcttgaattgggtagtttcataccactgagagaccctgtctcaaacaaaaatgttgc 529

                                                                       
Query: 361 ttgcacctgatcagcaatacttcaggctctcctctgacatctacacatacctttacatat 420
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 ttgcacctgatcagtaatacttcaggctctcctctgacatctacacatacctttacatat 589

                                                       
Query: 421 gtgagcacactccacatgtaaaagcacatatgcataaatacaca 464
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 gtgagcacactccacatgtaaaagcacatatgcataaatacaca 633


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 864
Length adjustment: 10
Effective length of query: 454
Effective length of database: 854
Effective search space:   387716
Effective search space used:   387716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)