Query= MSMg01no329_n14.b1 MSMg01no329_n14.b1 CHROMAT_FILE:
MSMg01no329_n14.b1 PHD_FILE: MSMg01no329_n14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:15:27 2005
(379 letters)
>mm_chr1_180777256_180778035
Length = 780
Score = 683 bits (353), Expect = 0.0
Identities = 371/377 (98%), Gaps = 1/377 (0%)
Strand = Plus / Minus
Query: 4 ggaattctctagagtc-ctttattttttctctttaccctcatgttcctgtggtctagctt 62
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 ggaattctctagagtcaatttattttttctctttaccctcatgttcctgtggtctagctt 521
Query: 63 gctgaaacatactttaaacttaaaattaaaagcctaggctgtgatttagcatataggact 122
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 520 gctgaaacatactttaaacttaaaattaaaagcctaggctgtgatttagcataaaggact 461
Query: 123 tttaattttaggttaatgggctgatagagaaagtataaaacaactcaaaattttgtaaat 182
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 tttaattttaggttaatggtctgatagagaaagtataaaacaactcaaaattttgtaaat 401
Query: 183 ttgtatttgggggaattttcctaaagttgtaaattatcccacttgatgggttgtaacaag 242
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 400 ttgtatttgggggaattttcctaaagttgtaaattatccgacttgatgggttgtaacaag 341
Query: 243 tctctgaaactattctgctgtgttactcgaatctctacagtgtagtttattgacagattg 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 tctctgaaactattctgctgtgttactcgaatctctacagtgtagtttattgacagattg 281
Query: 303 ccagatacactgagcctcttgctgggcacaccatacattcacaacctgtgtagctctctg 362
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 280 ccagatacactgagcctcttgctgggcacaccataaattcacaacctgtgtagctctctg 221
Query: 363 caaacagaccctcgaat 379
|||||||||||||||||
Sbjct: 220 caaacagaccctcgaat 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 379
Length of database: 780
Length adjustment: 9
Effective length of query: 370
Effective length of database: 771
Effective search space: 285270
Effective search space used: 285270
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no329_n14.g1 MSMg01no329_n14.g1 CHROMAT_FILE:
MSMg01no329_n14.g1 PHD_FILE: MSMg01no329_n14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:15:27 2005
(340 letters)
>mm_chr1_180614105_180614844
Length = 740
Score = 642 bits (332), Expect = 0.0
Identities = 338/340 (99%)
Strand = Plus / Plus
Query: 1 atttcagaggcaaccatgaggtgagccgtttcacagctggactttcttctattgacgtcc 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 201 atttcagaggcaaccatgaggtgagccgtttcacagccggactttcttctattgacgtcc 260
Query: 61 tgacctgacactctgtgtaatgtaaatacgcacaaataagaacgtgcctgtcgactgtcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgacctgacactctgtgtaatgtaaatacgcacaaataagaacgtgcctgtcgactgtcc 320
Query: 121 tttggccatgtgagttttgacactaaaaggatatgaggatatcagccctcctgctcatct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttggccatgtgagttttgacactaaaaggatatgaggatatcagccctcctgctcatct 380
Query: 181 ataggttaattatctccttccaaacggaagctgctttggcctgattcattctcacaacgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ataggttaattatctccttccaaacggaagctgctttggcctgattcattctcacaacgg 440
Query: 241 taaatggtcacaggaaaactggtagtctcaggtggccggcattaggaatccatttctggc 300
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taaatggccacaggaaaactggtagtctcaggtggccggcattaggaatccatttctggc 500
Query: 301 tcctgcaccaaaggagtgagggtctgatggagacttctcc 340
||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcctgcaccaaaggagtgagggtctgatggagacttctcc 540
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 340
Length of database: 740
Length adjustment: 9
Effective length of query: 331
Effective length of database: 731
Effective search space: 241961
Effective search space used: 241961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
