Query= MSMg01no331_i14.b1 MSMg01no331_i14.b1 CHROMAT_FILE:
MSMg01no331_i14.b1 PHD_FILE: MSMg01no331_i14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:17:27 2005
(358 letters)
>mm_chr1_133995560_133996317
Length = 758
Score = 661 bits (342), Expect = 0.0
Identities = 354/358 (98%)
Strand = Plus / Minus
Query: 1 agttgaaggttccaaggaccttgacagaccaaggatttccccaaaggggtctcccaggct 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 558 agttgaaggttccaaggaccttgacagaccaagaatttccccaaaggggtctcccaggct 499
Query: 61 gggcctgaagcccacgaggggcttgggaatgggaagtggaggagatctggcagggagttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 gggcctgaagcccacgaggggcttgggaatgggaagtggaggagatctggcagggagttg 439
Query: 121 gtggacagatagtgtacagctggggacactgggagagccagaattgcattgtgttttact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 gtggacagatagtgtacagctggggacactgggagagccagaattgcattgtgttttact 379
Query: 181 cacagttcctgacccctaacccgaggatgggaaaggacctgtcaccttcaaaaactccac 240
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 378 cacagttcctgacccctaacctgaggatgggaaaggacctgtcaccttcaaaaactccac 319
Query: 241 cgaacccatctcataggaaatggaaattcagaattgttttggagcagctcggtgtttgcc 300
|||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 cgaacccatcccagaggaaatggaaattcagaattgttttggagcagctcggtgtttgcc 259
Query: 301 agtgggtgagtaatgcacactgctgctaactggctcatgctctcctccaccccccacc 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 agtgggtgagtaatgcacactgctgctaactggctcatgctctcctccaccccccacc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 358
Length of database: 758
Length adjustment: 9
Effective length of query: 349
Effective length of database: 749
Effective search space: 261401
Effective search space used: 261401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no331_i14.g1 MSMg01no331_i14.g1 CHROMAT_FILE:
MSMg01no331_i14.g1 PHD_FILE: MSMg01no331_i14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:17:27 2005
(641 letters)
>mm_chr1_133813033_133814078
Length = 1046
Score = 1207 bits (624), Expect = 0.0
Identities = 637/644 (98%), Gaps = 5/644 (0%)
Strand = Plus / Plus
Query: 1 agtgaatctgctgaaaatcaccacatgcctccctatcactattaaaatctagtaataatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtgaatctgctgaaaatcaccacatgcctccctatcactattaaaatctagtaataatt 260
Query: 61 tggttttgtttgtttgttttttaagacagctgtggctgacttcacacacttacaacaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggttttgtttgtttgttttttaagacagctgtggctgacttcacacacttacaacaaca 320
Query: 121 taatcctgatgtttcctccacccagaaactgagacattcatgtttccttatgttggagat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taatcctgatgtttcctccacccagaaactgagacattcatgtttccttatgttggagat 380
Query: 181 tttctttctggtacaaagtttttagacttgttaggatggaactcccattgacttaaatga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttctttctggtacaaagtttttagacttgttaggatggaactcccattgacttaaatga 440
Query: 241 tgaaaattgttgtaatccaattgatggctctgaaatactgtttgggactaaaggagtcct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgaaaattgttgtaatccaattgatggctctgaaatactgtttgggactaaaggagtcct 500
Query: 301 tcagtggttaagagcacttcaatcactgaggttcatttcccagcacctacatggtagtgg 360
||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||
Sbjct: 501 tcagtggttaagagcacttcaatgactgaggttcatttcccagtacctacatggtagtgg 560
Query: 361 ctcacataactccataactccagtttcaggaaatcttgtttccctcttctgaactctgat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctcacataactccataactccagtttcaggaaatcttgtttccctcttctgaactctgat 620
Query: 421 taataaataaaatgactagacttctcaacctaaaaggaaccttgaaaatgccatgaagct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 taataaataaaatgactagacttctcaacctaaaaggaaccttgaaaatgccatgaagct 680
Query: 481 ggaaataaattaacataaaaggaaggagatagaagtagtaacaactgtcttttattagtc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ggaaataaattaacataaaaggaaggagatagaagtagtaacaactgtcttttattagtc 740
Query: 541 attatttatctatcactccttctcgggacaatcttgagtcatttt-----aagatttatt 595
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 741 attatttatctatcactccttctcgggacaatcttgagtcattttgttttaagatttatt 800
Query: 596 tttgctgggtgtggtagcacatgttttaaatccagaggcaagca 639
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tttgctgggtgtggtagcacatgttttaaatccagaggcaagca 844
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 641
Length of database: 1046
Length adjustment: 10
Effective length of query: 631
Effective length of database: 1036
Effective search space: 653716
Effective search space used: 653716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
