Query= MSMg01no334_b09.b1 MSMg01no334_b09.b1 CHROMAT_FILE:
MSMg01no334_b09.b1 PHD_FILE: MSMg01no334_b09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:21:24 2005
(500 letters)
>mm_chr1_161935350_161936245
Length = 896
Score = 864 bits (447), Expect = 0.0
Identities = 485/500 (97%), Gaps = 4/500 (0%)
Strand = Plus / Plus
Query: 1 agaccagatggtggccacatgtgtctagaagccaagaaggagcaggagaactaaatgcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agaccagatggtggccacatgtgtctagaagccaagaaggagcaggagaactaaatgcat 260
Query: 61 gggtggaactcaggccatatttagaaaactacaaacaggatcccaaacaaaagacagact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 261 gggtggaactcaggccatatttagaaaactacaaacaggatcccaaacaaaagacaggct 320
Query: 121 cctctgaagaacttccccttgctcagttgtgacaaagctaggacaatcgtgttcctgaaa 180
|||||||||||||||||||||||||||| |||||||||||||| ||||||| ||||||||
Sbjct: 321 cctctgaagaacttccccttgctcagttctgacaaagctaggaaaatcgtgctcctgaaa 380
Query: 181 catctgccaccaaagtcacatgtcccctctccttcttggctgctttggtcttccagcagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catctgccaccaaagtcacatgtcccctctccttcttggctgctttggtcttccagcagc 440
Query: 241 agcacaggtttgaaggtcttcatgcagtagggtcacttggagcacctgacagggcttcct 300
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agcacaggaaggaaggtcttcatgcagtagggtcacttggagcacctgacagggcttcct 500
Query: 301 gatacaaggctaaggatgatgctcaaggcagggtggaatatttcagctcaagcaaagcct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gatacaaggctaaggatgatgctcaaggcagggtggaatatttcagctcaagcaaagcct 560
Query: 361 gacaaaggcctgttgtagaaatgtagagctgtgtgcaatgactttggtcaagtcccttat 420
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 561 gacaaaggcctgttgtagaaatgtagagctgtgtgcgatgactttggtcaagtcccttat 620
Query: 421 tcattcagtgctattgtctgttatgctccggtgtgtgcttganatgtttctcatgctctt 480
||| ||||||||||| ||||||||||||||||||||||| ||||||||| |||||||
Sbjct: 621 tca----gtgctattgtcagttatgctccggtgtgtgcttgaaatgtttctcgtgctctt 676
Query: 481 ggaccttagattctatcagg 500
||||||||||||||||||||
Sbjct: 677 ggaccttagattctatcagg 696
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 500
Length of database: 896
Length adjustment: 10
Effective length of query: 490
Effective length of database: 886
Effective search space: 434140
Effective search space used: 434140
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no334_b09.g1 MSMg01no334_b09.g1 CHROMAT_FILE:
MSMg01no334_b09.g1 PHD_FILE: MSMg01no334_b09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:21:24 2005
(106 letters)
>mm_chr1_162090265_162090770
Length = 506
Score = 174 bits (90), Expect = 1e-48
Identities = 102/106 (96%)
Strand = Plus / Minus
Query: 1 cagctttccaagtgagacataactgatttagtctccctcagaggcagtacaccaatctct 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 306 cagctttccaagtgagacataactgatttagtctccctcaaaggcagtacaccaatctct 247
Query: 61 tgtgtttatggcgatttcttaggaaaaatacaatgggagatgactg 106
|||||||| || |||||||||||| |||||||||||||||||||||
Sbjct: 246 tgtgtttacggtgatttcttaggacaaatacaatgggagatgactg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 106
Length of database: 506
Length adjustment: 8
Effective length of query: 98
Effective length of database: 498
Effective search space: 48804
Effective search space used: 48804
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
|
