TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCAGAATCCGCGG
AATTCTGTACTAAATCCATCTGATCCTGGGCTTATTTTGGTTGGAAGGTC
TTTAATAATTTTCTATTTTTTAATGAGATATGTTTACATAGTTTACCTGG
TATTGATTTAACCTTGGTATGTAGTACCTATCTAGAAAACCATTAATTTC
ATCTAGATCTTCCAATTTTGTTGAGTATAGGCTTTTGTAACAGGATCTGA
TGATTTTTTAAAATTTTCTCCATTTCTGTTATTATGTCACCCCTTTCATT
TCTGTTGTTGTTTTTTTGTTTTGTTTTGTTTTGTTTTTGTTTTGCTTTGT
TTTGTTTTGTGGGGGGTTGTTTTTGTTTTTTTGAGACAGGATTTTTCTGT
GTAGCCCTGGCTGTCCTGGAACTCACTTTGTAGACCAGGCTGGCATCAAA
CTCAGACATCTGCCTGCCTCTGCCTCCCAAGTGCTGAGATTAAAGGCATG
CACCACCACCACCCTGCTTCATTTCTGATTTTGTAAATTTGGATACTGCC
TCTGGCCCTCTAGTTAGTTTGACTATGGGGTTATCTATTTTATTGATTCT
CTCAAAGAACCAGCTTTTTGGTTGGGTTGATTCTTTGTAATGCTCTCTTT
TGCTTCCATTTTGGTTGATTTTAGCCCTTGATTCCGACTATTTTCTTGTC
CTTCCTTCTCCTCTTGGAATCCGGCTTGCCTCCTTTTTTGTTCTTTGAAA
CTCTTAACGGAGATCN

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXACAAGCTGAGTGACAGATGGGTTACAAG
GAAGGTAATAAACAACAGAATGTTCTGCAGAGTTTTTAGTACTGTTCTTA
ATCACCTATTATTATGTTTAGACATTTCTTGGCATTTTTTATTTCTATTT
TAATTAACAGTTTTCTTGTAGCTACACAGAATATATATTTGAAAACTTCG
CCTTTCTTTCTGAAGTTCATTTTTATTTACTATATGTAAAACCAATTGCT
ATTATCCCCATATAATGTGTTAAATGGTCTAATCATTCAGATAACTTTAT
CTGCTTTTTCCGGGCAAATAGCTATGAATCAATGATCATGCTGAAGTTCA
AAACTCATTCATTTCTTTTGCATCAACATATCAAGATAAAGTTCATTTAT
CTGTTAATTTACATTCATTATTCAGCGATGAGATCAGGGATGCGATGACA
GAGCAACCACACTGTCACTTCCTTATGCTTTGCCAAATGTTTGTTGTGAG
GTCCTGAGCAGGGCCTGAAGTACACGGCAGACTTGCTATTGGAAGAATCT
TCTCTGGCCACTGTCAATACATACCTGAATTGTGAAGAACCATTCTTGTC
AGAACATGGAAAAGAAAGCTGTGACAGATAAAGGAATATCCAGGTCTCAA
AGGTTCAATGTCTCTTTTGTTCAATCAACCTCATTGGTGCCCTCN

Query= MSMg01no334_i01.g1 MSMg01no334_i01.g1 CHROMAT_FILE:
MSMg01no334_i01.g1 PHD_FILE: MSMg01no334_i01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:21:57 2005
         (479 letters)



>mm_chr1_111095192_111096069
          Length = 878

 Score =  880 bits (455), Expect = 0.0
 Identities = 473/479 (98%), Gaps = 1/479 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   acaagctgagtgacagatgggttacaaggaaggtaataaacaacagaatgttctgcagag 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 678 acaagctgagtgacagatgggttacaaggaaggtaataaacaacagaatgttctacagag 619

                                                                       
Query: 61  tttttagtactgttcttaatcacctattattatgtttagacatttcttggcattttttat 120
            |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 -ttttagtagtgttcttaatcacctattattatgtttagacatttcttggcattttttat 560

                                                                       
Query: 121 ttctattttaattaacagttttcttgtagctacacagaatatatatttgaaaacttcgcc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 ttctattttaattaacagttttcttgtagctacacagaatatatatttgaaaacttcgcc 500

                                                                       
Query: 181 tttctttctgaagttcatttttatttactatatgtaaaaccaattgctattatccccata 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 tttctttctgaagttcatttttatttactatatgtaaaaccaattgctattatccccata 440

                                                                       
Query: 241 taatgtgttaaatggtctaatcattcagataactttatctgctttttccgggcaaatagc 300
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 439 taatgtgttaaatggtctaatcattcagataacgttatctgctttttccgggcaaatagc 380

                                                                       
Query: 301 tatgaatcaatgatcatgctgaagttcaaaactcattcatttcttttgcatcaacatatc 360
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 379 tatgaatcaatgatcatgctgaagttcaaaactcattcatttcttttgcatcaaaatatc 320

                                                                       
Query: 361 aagataaagttcatttatctgttaatttacattcattattcagcgatgagatcagggatg 420
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 319 aagataaagttcatttatctgttaatttaaattcattattcagcgatgagatcagggatg 260

                                                                      
Query: 421 cgatgacagagcaaccacactgtcacttccttatgctttgccaaatgtttgttgtgagg 479
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 cgatgacagagcaaccacactgtcacttccttatgctttgccaaatgtttgttgtgagg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 479
Length of database: 878
Length adjustment: 10
Effective length of query: 469
Effective length of database: 868
Effective search space:   407092
Effective search space used:   407092
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)