NTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCATTACATGCTTTCTCCTTGACTAGATCAAATGAGACATGTCTGT
AATTCAAGAACTGACAGTCAGAAGTAGGAAGATCATGAGAGAGAGGCTGG
CCTAGGTAACAGTACAAACTTATCTAAAAGACAAGGGCTAGAATACAGCT
TAGTGGTGTTAGACTAGACTTGATTTGCAGGTACTATGTCCCAACTTTGA
TCCACAGCCACATTCAAAATTAAAAATATATCTTCATGTTCTTGAAGTAA
CTGGGTGGTTTGTAAGAGAATGAGAGAATGCTAATAAGGCAAGAAGTAGG
ACAAAGAGAGTGATGATCATGGATCCTTGCTCTGGCAATTAGAAGAAAAG
CATCAGTGGTGCTGGGAAGGACTTCTCAGGTAAAGAGGAGGACCTAGATA
TTTGAGGTCTTGACATTGATACCTAGATATAGATAACAGGTGATATCATA
GATATTAGGTGAGCTATCACAACTATTCTACATCGGCAAGAATGCAGAGG
AGGCAGAGAAGGAAGAGGAAGAGGAAAATAAAGATGAAGACAAAGAGAAA
GACTAAGAGAAAGAGATAAGGGACCCCAGAGAATGCGAGGATTCCCAGAG
AGTGCTAACCATTCATCTAGCAGAATCAAGCAGTGAGCGGAAGATTCAGT
AATAGAGCCTGTCTAAAAGATTAAGCN

NCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCTG
AGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAA
ATCAAAACAACCCTAAGATTCCACCTCACACCAGTCAGAATGTCTAAGAT
CAAAAATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAA
CACTCCTCCATTGTTGGTGGGATTGCAGGCTTGTACAACCACTCTGGAAA
TCAGTCTGGCGGTTCCTCAGAAAATTGGACATAGTACTACCGGAGGATCC
AGCAATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACTGGTAAGA
AGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGA
AGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAAT
GTGGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAAT
TTATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGT
GAGGTAACACATTTCACAAAGGAACTCACACAATATGTACTCACTGGATA
AGTGGATATTAACCCCCAACCCTAGGATACCCCAGATATAAGATATTATT
TTCCTAAACCCCTTGAAACTCCCGAAAAATGTAGGACCGGGAAGGTGGGC
G

Query= MSMg01no337_g10.b1 MSMg01no337_g10.b1 CHROMAT_FILE:
MSMg01no337_g10.b1 PHD_FILE: MSMg01no337_g10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:25:46 2005
         (617 letters)



>mm_chr1_102046599_102047615
          Length = 1017

 Score = 1139 bits (589), Expect = 0.0
 Identities = 607/613 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcattacatgctttctccttgactagatcaaatgagacatgtctgtaattcaagaa 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcattacatgctttctccttgactagatcaaatgagacatgtctgtaattcaagaa 264

                                                                       
Query: 65  ctgacagtcagaagtaggaagatcatgagagagaggctggcctaggtaacagtacaaact 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctgacagtcagaagtaggaagatcatgagagagaggctggcctaggtaacagtacaaact 324

                                                                       
Query: 125 tatctaaaagacaagggctagaatacagcttagtggtgttagactagacttgatttgcag 184
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 325 tatctaaaagacaagggctagaatacagcttagtggtgttagactagaattgatttgcag 384

                                                                       
Query: 185 gtactatgtcccaactttgatccacagccacattcaaaattaaaaatatatcttcatgtt 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gtactatgtcccaactttgatccacagccacattcaaaattaaaaatatatcttcatgtt 444

                                                                       
Query: 245 cttgaagtaactgggtggtttgtaagagaatgagagaatgctaataaggcaagaagtagg 304
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 445 cttgaagtaactgggtggtttgtaagagaatgagagaatgctaataatgcaagaagtagg 504

                                                                       
Query: 305 acaaagagagtgatgatcatggatccttgctctggcaattagaagaaaagcatcagtggt 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 acaaagagagtgatgatcatggatccttgctctggcaattagaagaaaagcatcagtggt 564

                                                                       
Query: 365 gctgggaaggacttctcaggtaaagaggaggacctagatatttgaggtcttgacattgat 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gctgggaaggacttctcaggtaaagaggaggacctagatatttgaggtcttgacattgat 624

                                                                       
Query: 425 acctagatatagataacaggtgatatcatagatattaggtgagctatcacaactattcta 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 acctagatatagataacaggtgatatcatagatattaggtgagctatcacaactattcta 684

                                                                       
Query: 485 catcggcaagaatgcagaggaggcagagaaggaagaggaagaggaaaataaagatgaaga 544
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 685 catcggcaagaatgcagaggaggcaaagaaggaagaggaagaggaaaataaagatgaaga 744

                                                                       
Query: 545 caaagagaaagactaagagaaagagataagggaccccagagaatgcgaggattcccagag 604
           ||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 745 caaagagaaagacaaagtgaaagagataagggaccccagagaattcgaggattcccagag 804

                        
Query: 605 agtgctaaccatt 617
           |||||||||||||
Sbjct: 805 agtgctaaccatt 817


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 617
Length of database: 1017
Length adjustment: 10
Effective length of query: 607
Effective length of database: 1007
Effective search space:   611249
Effective search space used:   611249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)