GACTCCTATAGGTACAGGATCCGCGGAATTCAGATAGCTATTGCAATAAC
ATGGGGAAGAGATTCACTAGATGGAGTCTAATTATAATGGTGAGCATGAT
TTGAAATTGGATAGAATATACACTATAAATGAGGACTCTCTTCCTAAGTC
ATTACTTTATGGATTATTATATAAATGCTAAAGTGTACATTGCAGACATT
TGCTTTCTTTGCAGATATATGTGTGTGTGTGTGTGTGTGTATACAAATGT
CTGCAAAGAAAGCAAATACACACACATATATATATATTGGTGGTCAAAGT
TTTATCTTTTCAAGAAGTCCCTGGTTAGCATTACCTACAGGCCACCCAGT
AAAACATCGTAGTTCTTACGACTGAAGGACTCATGGGATCAGCAACATTA
GCTCACAAAGCTAACATTTGCTATGCATGCTTGGTATCATCAGGCCCCAG
CAACCTCACAAGGGTGGGAGGAGAGAGTGACATGATCTCCATGAGGTTGA
CCTCTGACTTCTACATATGTATTATGGTGCACATGTGTTCTGCCCACACC
ATATACTGAAATACATAGACAACATTATATTAATAAAGTTTAATAATCTG
TTATCATCCTCATTGTCGTCATCATCATCATTGCCTTGGGCACTCTACAT
AGTTTAACAGATATTTCTGTATTATGTTAGAGACTACCAAAATGGTCACT
TGCTCTCAGTGGATCTTTGTGGACACCTGCATGTAGC

ATAGGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAGAGAAG
CACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAA
AACAACCCTAAGATTCCACCTCACACCAGTCAGAATGTCTAAGATCAAAA
ATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTC
CTCCATTGTTGGTGGGATTGCAGGCTTGTACAACCACTCTGGAAATCCGT
CTGGCGGTTCCTCATATTTTGGACATAGTACTACCGGAGGATCCAGCAAT
ACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACTGGTAAGAAGGACA
CATGCTCCACTATGTTCATAGCAGCATTATTTATAATAGCCAGAAGCTGG
AAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTA
CATCTACTCAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGA
AATTCCTAGCCCAATGGATGGATCTGGAGGGCATCATCCTGAGTGAGGTA
TCTCCTTCTCTAAGGAACTCACACAATATGTATTCTCTGACAATTGGATA
TTAACCCTAATCCTAGGATATCCTTGATATTATAATATATTTCCTTCAAT
TTCTTGTATTCTTCACAAATATGAATCTATGTATTGTAGTT

Query= MSMg01no338_g01.b1 MSMg01no338_g01.b1 CHROMAT_FILE:
MSMg01no338_g01.b1 PHD_FILE: MSMg01no338_g01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:27:00 2005
         (639 letters)



>mm_chr1_41357217_41358261
          Length = 1045

 Score = 1031 bits (533), Expect = 0.0
 Identities = 629/703 (89%), Gaps = 67/703 (9%)
 Strand = Plus / Plus

                                                                       
Query: 4   gaattcagatagctat-tgcaataacatggggaagagattcactagatggagtctaatta 62
           |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 gaattcagatagctatatgtaataacatggggaagagattcactagatggagtctaatta 202

                                                                       
Query: 63  taatggtgagcatgatttgaaattggatagaatatacactataaatgaggactctcttcc 122
           |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct: 203 taatggtgagcatgatttgaaattggatagaacatacactataaatgagaactctcttcc 262

                                                                       
Query: 123 taagtcattactttatggattattatataaatgctaaagtgtacattgcagacatttgct 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 taagtcattactttatggattattatataaatgctaaagtgtacattgcagacatttgct 322

                                                                       
Query: 183 ttctttgcagatata----tgtgtgtgtgtgtgtgtgtgtatacaaatgtctgcaaagaa 238
           |||||||||||||||    |||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ttctttgcagatatatgtgtgtgtgtgtgtgtgtgtgtgtatacaaatgtctgcaaagaa 382

                                                                       
Query: 239 agcaaatacacacac--------------------------------------------- 253
           |||||||||||||||                                             
Sbjct: 383 agcaaatacacacacacacacacacacacacacacacacacacacacacacacacatata 442

                                                                       
Query: 254 -----------atatatatatattggtggtcaaagttttatcttttcaagaagtccctgg 302
                      ||||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct: 443 tatatatatatatatatatatattggtggtcaaagtcttaacttttcaagaagtccctgg 502

                                                                       
Query: 303 ttagcattacctacaggccacccagtaaaacatcgtagttcttacgactgaaggactcat 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ttagcattacctacaggccacccagtaaaacatcgtagttcttacgactgaaggactcat 562

                                                                       
Query: 363 gggatcagcaacattagctcacaaagctaacatttgctatgcatgcttggtatcatcagg 422
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 gggatcagcaacattagctcacaaagctaacatttgctatgcatgcttggtatcatcagg 622

                                                                       
Query: 423 ccccagcaacctcacaagggtgggaggagagagtgacatgatctccatgaggttgacctc 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 ccccagcaacctcacaagggtgggaggagagagtgacatgatctccatgaggttgacctc 682

                                                                       
Query: 483 tgacttctacatatgtattatggtgcacatgtgttctgcccacaccatatactgaaatac 542
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 683 tgacttctacatatgtattatggcgcacatgtgttctgcccacaccatatactgaaatac 742

                                                                       
Query: 543 atagacaacattatattaataaagtttaataatctgttatcatcctcattgtcgtcatca 602
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 743 atagacaacattatattaataaagtttaataatctgttatcatccccattgtcgtcatca 802

                                                      
Query: 603 tcatcat------tgccttgggcactctacatagtttaacaga 639
           |||||||      ||||||||||||||||||||||||||||||
Sbjct: 803 tcatcatcattattgccttgggcactctacatagtttaacaga 845


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 56
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1045
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1035
Effective search space:   651015
Effective search space used:   651015
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)