Query= MSMg01no338_h23.b1 MSMg01no338_h23.b1 CHROMAT_FILE:
MSMg01no338_h23.b1 PHD_FILE: MSMg01no338_h23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:27:08 2005
(452 letters)
>mm_chr1_61387230_61388081
Length = 852
Score = 820 bits (424), Expect = 0.0
Identities = 442/448 (98%)
Strand = Plus / Plus
Query: 5 gaattcttcctatcctacaaaagcaaacccctatttagttctgcaactcttacttagtca 64
||||||||||||||| | |||||||||||||||||||||||||||| |||| ||||||||
Sbjct: 205 gaattcttcctatccaagaaaagcaaacccctatttagttctgcaattctttcttagtca 264
Query: 65 agctttctcctacctataccaaacacatttctgtctatcacaaatctcttgaaacaaaag 124
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 agctttctcctacttaaaccaaacacatttctgtctatcacaaatctcttgaaacaaaag 324
Query: 125 gttcactgatatttaataagaatctctctgacatccttactggtaaaatgctttaagaat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gttcactgatatttaataagaatctctctgacatccttactggtaaaatgctttaagaat 384
Query: 185 tgttttattatataaagaattcctatgggaatttgagatggataggccaatttccacttg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tgttttattatataaagaattcctatgggaatttgagatggataggccaatttccacttg 444
Query: 245 gtctgactaccaatgcaaaggataataggctcagcatccctggctatgggaactctgatg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gtctgactaccaatgcaaaggataataggctcagcatccctggctatgggaactctgatg 504
Query: 305 cccagaccaaaatgcttaagagagtccatcaaactattatggcttgactgctggaacact 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cccagaccaaaatgcttaagagagtccatcaaactattatggcttgactgctggaacact 564
Query: 365 tcccacccacactacaccctgtttcttacagctacacatatttacaggtatgttaagttc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tcccacccacactacaccctgtttcttacagctacacatatttacaggtatgttaagttc 624
Query: 425 attaataagagtggaaaatggctgtctg 452
||||||||||||||||||||||||||||
Sbjct: 625 attaataagagtggaaaatggctgtctg 652
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 452
Length of database: 852
Length adjustment: 10
Effective length of query: 442
Effective length of database: 842
Effective search space: 372164
Effective search space used: 372164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no338_h23.g1 MSMg01no338_h23.g1 CHROMAT_FILE:
MSMg01no338_h23.g1 PHD_FILE: MSMg01no338_h23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:27:08 2005
(456 letters)
>mm_chr1_61582888_61583740
Length = 853
Score = 859 bits (444), Expect = 0.0
Identities = 452/456 (99%), Gaps = 3/456 (0%)
Strand = Plus / Minus
Query: 1 ttttaaaatcataaagttatcaccttatttctatacacaaattgaattattttgtctgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 ttttaaaatcataaagttatcaccttatttctatacacaaattgaattattttgtctgca 594
Query: 61 gcaacagtaacatcaacagataattgtagttgtttcatttttagttattgcacatgttat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 gcaacagtaacatcaacagataattgtagttgtttcatttttagttattgcacatgttat 534
Query: 121 tcattgttttagaactaaatattagatattgccaaataataacaaaaatcacttaaggac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 tcattgttttagaactaaatattagatattgccaaataataacaaaaatcacttaaggac 474
Query: 181 tcatattcataatcacctaaatattacaggcaaagcattggttataataagtgtctatta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 tcatattcataatcacctaaatattacaggcaaagcattggttataataagtgtctatta 414
Query: 241 tttttgaagggatatgtgatcactgcaaacatgaaaaattgtaagacttagacaggcttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 tttttgaagggatatgtgatcactgcaaacatgaaaaattgtaagacttagacaggcttt 354
Query: 301 atagttctgtttgctgtaactcaagaaatacgtatgatgactcaaggaaaaagaagggga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 atagttctgtttgctgtaactcaagaaatacgtatgatgactcaaggaaaaagaagggga 294
Query: 361 aggaagaatattgtttgcagtctctggatcgcaacagaacccactagcttgttaacttgg 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 293 aggaagaatattgtttgcagtctctggatcgcaacagaacccactagcttgttaacctgg 234
Query: 421 ccagcatcttgccttttctgaattgtccattcctga 456
||| ||||||||||||||||||||||||||||||
Sbjct: 233 cca---tcttgccttttctgaattgtccattcctga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 456
Length of database: 853
Length adjustment: 10
Effective length of query: 446
Effective length of database: 843
Effective search space: 375978
Effective search space used: 375978
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
