NTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCCTTGACGTCTTTTATTTATTTAAAAAAATGTATTTTGTCTTAGT
GCTCAGTTGCTATGAAAAGACAGCATGACCCAAGGCAACTCTTAGGAAAG
AAAGCTTTTAATTGAGGGCTTGCTTATAGTTTCAGAGGTTTAGTCTACTA
TCATTATGGTGGGGAGCATGGTGGCACACAGGCAGAAGCTGGAGCAGGAA
CTGAGAGCTACACCCTGATCCATAGGCAGAGAGAGAACCTTGGGCCTGGT
ATAGGTTTCTGAAACCTCAAAGCCCAACCCAGTGACACATTGTCTCCAAC
AAAGCCACACCCACGCCAACAAAACCACACCTCCTAATCCTTCTAATCCT
TCCAGATGGTGCCACTCTGGTGACTAAGCATTTTAATGTAGGGGCCTATA
GGGGCCACTCTCATCAAACCACTGCAGGATTATTCAAGGTATTAAGTCCA
TAGTCCTTTTGCTGTGGTTTCTGTTGGTGTTTTTTTTGTTTTTTTCAGNA
TGAAGCCCAGGCAGACCTCAAGCTTACAGTAGCCCTCTTGGCTAAACCTC
ATAGATACTGGACTACAGGGATATGCTTACACACTGCACTTTTTTGTTTT
GGTTTTCCGGAACTGGAAATGCCCTTATTTCTGATGAAAAAGGATCCAAT
AAAGATTAAACTGTGGAAAAAAGGGATTTAAAAAAAAATAAATAAATTGG
GGG

GTGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXCTCCTCCAATGGGCATCACAATAGTCCCGAGTGT
CCCAAGTGCAGCTGGCATGCCAAACATGTGTGGCTATGTTTATTCTCCCG
AAATAAATATTTATAGAACCCACTATGTGCCAGCAGCATCAAGGAAGACT
TTGTTCTTCTACCTTCCCAGGTTTCATGGACCCAAAGCAAGACAGGCTGG
GTAAAACACACCTGCTAAGAGAAGCCAACTAAAAAATCCTGTTTATCCAG
AACACTCTTGCCCCAAGGAAGGAGGGAAGGAAACCTGAGGAGGCCATCAC
AGCAGAAGGGCTCAGACCAGCGGAGGGCAGTGCTGTGCAGTAGATCCAAG
CCAAGTACTGGCACAGAGTCAGCCCTTCCTGAGGAGACCAGACTCCAAGC
TGCAGGAACTCAGCTTAGCTGGAAGGTGTCTGCCATTTGCTTAAAACCCA
GGGACTATTGAGTGTGGGTCCTTGGAGATCAGTCTTGAGTGCTTCCCGGG
AACCTTTGGGGACACAGACATTCAGATGCTGTGCTGTCTCCACACTTTAC
CTTCTTAGACACCCAAACAATCCTGACACTTCTTTTCCCCAGAAAAGCTT
GGCCCAGAATTTCCCAACCCAGTGTTACTTAATTGAGCCTCCCGGGTGCC
TTCTTCCTGGGGCCTGGCAACCCAGGGGGATGAACTTTTCCAAAAGGCCC
AAAAAATCCCCCCAAAG

Query= MSMg01no338_n07.g1 MSMg01no338_n07.g1 CHROMAT_FILE:
MSMg01no338_n07.g1 PHD_FILE: MSMg01no338_n07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:27:33 2005
         (506 letters)



>mm_chr1_184045629_184046534
          Length = 906

 Score =  932 bits (482), Expect = 0.0
 Identities = 500/506 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctcctccaatgggcatcacaatagtcccgagtgtcccaagtgcagctggcatgccaaaca 60
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 ctcctctaatgggcatcacaatagtcccgagtgtcccaagtgcagctggcatgccaaaca 647

                                                                       
Query: 61  tgtgtggctatgtttattctcccgaaataaatatttatagaacccactatgtgccagcag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 tgtgtggctatgtttattctcccgaaataaatatttatagaacccactatgtgccagcag 587

                                                                       
Query: 121 catcaaggaagactttgttcttctaccttcccaggtttcatggacccaaagcaagacagg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 catcaaggaagactttgttcttctaccttcccaggtttcatggacccaaagcaagacagg 527

                                                                       
Query: 181 ctgggtaaaacacacctgctaagagaagccaactaaaaaatcctgtttatccagaacact 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 ctgggtaaaacacacctgctaagagaagccaactaaaaaatcctgtttatccagaacact 467

                                                                       
Query: 241 cttgccccaaggaaggagggaaggaaacctgaggaggccatcacagcagaagggctcaga 300
           ||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||
Sbjct: 466 cttgccccaaggaaggagggagggaaacctgaggaggccctcccagcagaagggctcaga 407

                                                                       
Query: 301 ccagcggagggcagtgctgtgcagtagatccaagccaagtactggcacagagtcagccct 360
           |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||
Sbjct: 406 ccagcggagggcagtgctgtgcagtagatccaagccaagtactggctcagaatcagccct 347

                                                                       
Query: 361 tcctgaggagaccagactccaagctgcaggaactcagcttagctggaaggtgtctgccat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 tcctgaggagaccagactccaagctgcaggaactcagcttagctggaaggtgtctgccat 287

                                                                       
Query: 421 ttgcttaaaacccagggactattgagtgtgggtccttggagatcagtcttgagtgcttcc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 ttgcttaaaacccagggactattgagtgtgggtccttggagatcagtcttgagtgcttcc 227

                                     
Query: 481 cgggaacctttggggacacagacatt 506
           ||||||||||||||||||||||||||
Sbjct: 226 cgggaacctttggggacacagacatt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 506
Length of database: 906
Length adjustment: 10
Effective length of query: 496
Effective length of database: 896
Effective search space:   444416
Effective search space used:   444416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)