CGGGCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCTTTGTTCAGCTCTGAGCCCCATTTTTTAATGGGGTTATT
TGATTTTCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTA
GTCCCCTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGT
GGTCTTTTTGTCTTATTGATGGTGTCTTTTGCCTTGCAGAAACTTTGGAG
TTTCATTAGGTCCCATTTGTCAATTCTCGATCTTACAGCACAAGCCATTG
CTGTTCTGTTCAGGAATTTTTTCCTGTGCCCATATCTTCAAGGCTTTTCC
CCACTTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCC
TTGATCCACTTAGATTTGACCTTAGTACAAGGAGATAAGTATGGATCGAT
TCGCATTCTTCTACACGATAACAACCAGTTGTGCCAGCACCAATTGTTGA
AAATGCTGTCTTTCTTCCACTGGATGGTTTTAGCTCCCTTGTCGAAGATC
AAGTGACCATAGGTGTGTGGGTTCATTTCTGGGTCTTCAATTCTATTCCA
TTGGGCTACTTGTCTGTCTCTATACCAGNACCATGTAGTTTTTATCCCAA
TTGCTCTGTAATAAAGCTTTAGGTCTGGCATGGTGATTCCACCCCAGGTA
CTTTTATCCTTGAAAAGACTTTTTGGTATCCCAGGTTTT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXTGTTCATGCTGTTGTTTACAAGAGATCATAAAGTAGTTTTTTTTG
TATTTTCAGGGAATATTTAGCAGACATATTTACAATAAAGGAGCTATACT
ACTTGATTTTTTACTCCCAGTATCTTTAAATATAGATAACTATGAGATTT
TTAATGAGCAAAAGTGACTTCATACAATTATCTGATTGCATTCTCTTGTC
TATGTCACTTGAGAATGCTTCTCTTATTCCTGGGGAATATATTCCAATGA
CCTCCAGTGGATGTTTGAAACTGTATGTTGCACCAACCTGTCTATACATA
CATAATCATAAATACCCCCGCAAACCATGACTCCCCTGTACTTGGTGTGT
GTGTGTATGTTAAATGTGGTTTAATGTTTTGCTATCCATTAAAACACATC
TTCTTTTCATATCTTTTATTTTAATTTAGCTTAATAGCACATGAGATCAT
AAATCTTCTATCATTCTTAGTTTTGATAGACTCATCCTCTATTTCTCCTC
CCTTCATCTCTTTCCCATCCTTTTAAAACCACAGCATCTGGAATTTCCCT
CTGGGTTTTCATATCAGATGAGTTTTAACACTCTTGGTTAAAATTTTTTA
CTCCCACTGCAAGATATTGGTTGCCCAAATAAATTCTCCATGAAAATTTC
TTCCCCCTAAAGTTTCCCCGGGCCCT

Query= MSMg01no339_i08.g1 MSMg01no339_i08.g1 CHROMAT_FILE:
MSMg01no339_i08.g1 PHD_FILE: MSMg01no339_i08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:28:22 2005
         (520 letters)



>mm_chr1_99188582_99189498
          Length = 917

 Score =  804 bits (416), Expect = 0.0
 Identities = 421/424 (99%), Gaps = 3/424 (0%)
 Strand = Plus / Minus

                                                                       
Query: 97  cttgattttttactcccagtatctttaaatatagataactatgagatttttaatgagcaa 156
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 917 cttgattttttactcccagtatctttaaatatagataactatgagatttttaatgagcaa 858

                                                                       
Query: 157 aagtgacttcatacaattatctgattgcattctcttgtctatgtcacttgagaatgcttc 216
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 857 aagtgacttcatacaattatctgattgcattctcttgtctatgtcacttgagaatgcttc 798

                                                                       
Query: 217 tcttattcctggggaatatattccaatgacctccagtggatgtttgaaactgtatgttgc 276
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 tcttattcctggggaatatattccaatgacctccagtggatgtttgaaactgtatgttgc 738

                                                                       
Query: 277 accaacctgtctatacatacataatcataaatacccccgcaaaccatgactcccctgtac 336
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 accaacctgtctatacatacataatcataaatacccccgcaaaccatgactcccctgtac 678

                                                                       
Query: 337 ttggtgtgtgtgtgtatgttaaatgtggtttaatgttttgctatccattaaaacacatct 396
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||   
Sbjct: 677 ttggtgtgtgtgtgtatgttaaatgtggtttaatgttttgctatccattaaaacaca--- 621

                                                                       
Query: 397 tcttttcatatcttttattttaatttagcttaatagcacatgagatcataaatcttctat 456
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tcttttcatatcttttattttaatttagcttaatagcacatgagatcataaatcttctat 561

                                                                       
Query: 457 cattcttagttttgatagactcatcctctatttctcctcccttcatctctttcccatcct 516
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 cattcttagttttgatagactcatcctctatttctcctcccttcatctctttcccatcct 501

               
Query: 517 ttta 520
           ||||
Sbjct: 500 ttta 497


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 520
Length of database: 917
Length adjustment: 10
Effective length of query: 510
Effective length of database: 907
Effective search space:   462570
Effective search space used:   462570
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)