Query= MSMg01no340_j20.b1 MSMg01no340_j20.b1 CHROMAT_FILE:
MSMg01no340_j20.b1 PHD_FILE: MSMg01no340_j20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:29:39 2005
(637 letters)
>mm_chr1_15391459_15392495
Length = 1037
Score = 1216 bits (629), Expect = 0.0
Identities = 632/633 (99%)
Strand = Plus / Plus
Query: 5 gaattcttggacttttccaatctggaattcaggaatctggggttgggagaggggctatct 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttggacttttccaatctggaattcaggaatctggggttgggagaggggctatct 264
Query: 65 ctgggaagcagcctgaagccactagagcctggtctcaggacagctatgctagcctctgcc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctgggaagcagcctgaagccactagagcctggtctcaggacagctatgctagcctctgcc 324
Query: 125 aaggcaaaagagtgagcacaacatggagtggaagctgtcccagcctccaggcccaggcat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaggcaaaagagtgagcacaacatggagtggaagctgtcccagcctccaggcccaggcat 384
Query: 185 gggcgctctacacagaagaacacactgtctgagttgaaaatggcaaaaaaaagaaaagac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gggcgctctacacagaagaacacactgtctgagttgaaaatggcaaaaaaaagaaaagac 444
Query: 245 aaagaagctgaaatgttgagtgagctgcagtacagtggcccatcagacatgcacatcgtg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aaagaagctgaaatgttgagtgagctgcagtacagtggcccatcagacatgcacatcgtg 504
Query: 305 aggatgtatggcctggctttgagtagaacttgtgtttatgttcccaggcttgagaaagac 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aggatgtatggcctggctttgagtagaacttgtgtttatgttcccaggcttgagaaagac 564
Query: 365 tgtgctttactgcagaggggaaagaaacagatccagcgcttcaattatacaaacactttt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tgtgctttactgcagaggggaaagaaacagatccagcgcttcaattatacaaacactttt 624
Query: 425 tccccattgagtgcattataaggtttcaggaaattcactgtgcaatgtgtcattattttt 484
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 cccccattgagtgcattataaggtttcaggaaattcactgtgcaatgtgtcattattttt 684
Query: 485 agatttttttttaaactgaaaatttaaaagtggaataaaatgggagtttttctaattagg 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 agatttttttttaaactgaaaatttaaaagtggaataaaatgggagtttttctaattagg 744
Query: 545 taaggtataagataattagttaagaaaaagaggaaggaactactgattcaaaatgatacc 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 taaggtataagataattagttaagaaaaagaggaaggaactactgattcaaaatgatacc 804
Query: 605 ctgtctagctattatctccagatagattatgtt 637
|||||||||||||||||||||||||||||||||
Sbjct: 805 ctgtctagctattatctccagatagattatgtt 837
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1037
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1027
Effective search space: 643929
Effective search space used: 643929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no340_j20.g1 MSMg01no340_j20.g1 CHROMAT_FILE:
MSMg01no340_j20.g1 PHD_FILE: MSMg01no340_j20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:29:39 2005
(525 letters)
>mm_chr1_15438663_15439587
Length = 925
Score = 605 bits (313), Expect = e-177
Identities = 320/323 (99%), Gaps = 2/323 (0%)
Strand = Plus / Minus
Query: 1 cttggcagagttgggagatgagggggaaggtaaccagggagaactaagcaatatcacaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttggcagagttgggagatgagggggaaggtaaccagggagaactaagcaatatcacaaa 262
Query: 61 aggtgcatgaaacagaaaggggctatctaagaaaatagtttcctgggatagtaaatcttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggtgcatgaaacagaaaggggctatctaagaaaatagtttcctgggatagtaaatcttt 202
Query: 121 gaagattcatgtgttggaaccataatatccaaatattgttggttatatttgagatgaaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gaagattcatgtgttggaaccataatatccaaatattgttggttatatttgagatgaaac 142
Query: 181 attggggaagataagtcaagttaaagtcatgaggttaaggcacctatgatgaaatgactt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 attggggaagataagtcaagttaaagtcatgaggttaaggcacctatgatgaaatgac-- 84
Query: 241 taaaaggaggagaggtgagatggcaagcctactttcttaccacctgattccccttgccat 300
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 83 taaaaggaggagaggtgagatggcaagcctactttcttaccacccgattccccttgccat 24
Query: 301 gttgtgatgcagcagaaaggctc 323
|||||||||||||||||||||||
Sbjct: 23 gttgtgatgcagcagaaaggctc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 525
Length of database: 925
Length adjustment: 10
Effective length of query: 515
Effective length of database: 915
Effective search space: 471225
Effective search space used: 471225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
