Query= MSMg01no342_g11.b1 MSMg01no342_g11.b1 CHROMAT_FILE:
MSMg01no342_g11.b1 PHD_FILE: MSMg01no342_g11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:31:55 2005
(490 letters)
>mm_chr1_110671176_110672064
Length = 889
Score = 596 bits (308), Expect = e-174
Identities = 329/336 (97%), Gaps = 1/336 (0%)
Strand = Plus / Minus
Query: 155 agaggaaaactcctccattgctggttgtattgcaaagggttacaatcacttcattctgga 214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 889 agaggaaaactcctccattgctggttgtattgcaaagggttacaatcacttcattctgga 830
Query: 215 aatcaatctggaggttcctaaaaaaattggaaatttatctatctgaagacccagcaatat 274
||||||||||||||||||||| ||||||||||||| | |||||||||||||||||||||
Sbjct: 829 aatcaatctggaggttcctaagaaaattggaaattgacctatctgaagacccagcaatac 770
Query: 275 cagtcttgggcatgtacccaaaagattacccaccatgctacaagggtacttttccccata 334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 cagtcttgggcatgtacccaaaagattacccaccatgctacaagggtacttttccccata 710
Query: 335 tattcataatggccttgtttttatttgctgcttttatatggctatattggcagcaaaaat 394
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 709 tattcataatggccttgtttttatttgctgcttttatatggctatattgacagcaaaaat 650
Query: 395 ctttaaatctaaaaaataccctttgtaagcatgctcatagtcatgctcttagaaatatat 454
|||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 ctttaaatttaaaaa-taccctttgtaagcatgctcatagtcatgctcttagaaatatat 591
Query: 455 gcataagtttaaagaccctttgaaaatattcccaca 490
||||||||||||||||||||||||||||||||||||
Sbjct: 590 gcataagtttaaagaccctttgaaaatattcccaca 555
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 490
Length of database: 889
Length adjustment: 10
Effective length of query: 480
Effective length of database: 879
Effective search space: 421920
Effective search space used: 421920
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no342_g11.g1 MSMg01no342_g11.g1 CHROMAT_FILE:
MSMg01no342_g11.g1 PHD_FILE: MSMg01no342_g11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:31:55 2005
(450 letters)
>mm_chr1_110605717_110606566
Length = 850
Score = 839 bits (434), Expect = 0.0
Identities = 446/450 (99%)
Strand = Plus / Plus
Query: 1 atgtgcctgtcgcagcaaactcacatttcagatatagcttgttttttcatagcctgtgaa 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 atgtgcctgtcgcagcaaactcacatttcagatatagcttgttttttcatggcctgtgaa 260
Query: 61 accataattgacagatatgtccctgatatcttctgattaaattttaagctctaatacctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 accataattgacagatatgtccctgatatcttctgattaaattttaagctctaatacctt 320
Query: 121 aaacctaacatatacattttctgggaataaagagcttgaagatcctttaatcgtggacta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaacctaacatatacattttctgggaataaagagcttgaagatcctttaatcgtggacta 380
Query: 181 tgacaattcacagttcccatcatggcttaaaacttcctctcagataaccatagtgtaagg 240
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 381 tgacaattcacagttcccatcatggcttaaaacgtcctctcagataaccatagtgtaagg 440
Query: 241 aacatgtggaactaactctctgtgccccggtctcgagccataacccccatgtaaccttgg 300
|||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||
Sbjct: 441 aacatgtggaactaactctctgtgccccggtctcaagccatgacccccatgtaaccttgg 500
Query: 301 aaaccaagccatagaatgtgtggatgaaagtgataaggttgcagtaagggaattaatgtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaaccaagccatagaatgtgtggatgaaagtgataaggttgcagtaagggaattaatgtg 560
Query: 361 taaaatccttagttatgattggctgaaattagcttacaaactgccgactggccaccgcaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taaaatccttagttatgattggctgaaattagcttacaaactgccgactggccaccgcaa 620
Query: 421 ctcactcagtcgtatagtccaatacagaca 450
||||||||||||||||||||||||||||||
Sbjct: 621 ctcactcagtcgtatagtccaatacagaca 650
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 450
Length of database: 850
Length adjustment: 10
Effective length of query: 440
Effective length of database: 840
Effective search space: 369600
Effective search space used: 369600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
