XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTCTGAG
GAATTGTGTTTGGCTTTACTGTACCAGAATAAATATTTAATGACACGTTT
CTGAATCTTATTAGTTTCTCTAGTGGGGATGAAGGTAAGAAGCTATTTTC
CAGAACATGTGAGAGGTGCAGATAAGGCAGTGCATACATGCTGCAGTTGA
GAAAAAGATACAGGGCAGGTTTCTCAACACTAAACTCACTCTATCCATTT
CCTACTTTTCAGTACCAGGGTAAGTCCTACTTTATATCAAACAAATGATG
CTACTTCTTTCTGATATGTCTTAAAATGAGCTGTAATGGGTTAACTAAAT
TACAGTGTTTATAAGGCAACAGACATTCATTCAAAAATGCATAAGCTATA
AAGGCTGCCTTTCTTGGGTATTCTAGGAAAGATAATTCTTTGCTTTACTG
GGACAGATTTTGGAATTTCGTTCTACCTTTGGACCTTGAAATCTGTAGAT
ATAAAGTGAAAATATATTTAGTGCTTAATATTCCTGTGGAAAATCTTACC
GATTTTTCCCCATGGTACCAGTCCTTTTCCTGTTTCTCCCTTATTCCCTC
TTCCTTACTCTCTTAGCGTTCCGTTCCTCCAACTTTTCGTAAAACTTTTC
CCTCCTTTTTATCTTTTTTGTCCTCTATATACATCTATAATTCCCCTCTC
TTCCCCTTCTTATAACCTTTTTTCCCTCCTGCTCTTTCTCTTTCCCCCTT
CCCCTGTCTATCCATTCCT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXTCACCTGAGGAATACTGAATGGCAGAGAAGCACCTGT
AAAAATGTTCAACATCCTTAACCATCAGGGAAATGCAAATCAAAACAACC
CTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATGAAAAATTCAGG
TGAAAGCAAATGCTAATGAGGATGTGGAGAAAGAGGAACACTCCTCCATT
GTTGGTGGAATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGCAG
TTCCTCAGAAAATTGGATATAGTACTACCAGAGGATCCAGCAACACCTCT
CCTGGGCATATATCCAGAAGATGTCCCAACCGGTAAGAAGGACACATGCT
CCACTATGTTTATAGCAGCCTGATTTATAATAGCCAGAAGCTGGAAAGAA
CCCAGATGCCCCTCAACAGAGTAATGGATACCGAAAATGGGATACATTTA
CACCATGGAGGACTAATCTGCCATTAAAAAAAAGAATTTTTGGAAATTCC
TAGGCCAAGGAAGGGGCCTTGGAGGGCTTCATCCTGAGTGGGGGAACCCC
ATCCCACAGGAATCCCCAAATTGTGCCCCCTTTATAGTGTAATTATCCCC
AAAATTTTGATACCCCCTATCTAAAAAAAATTTTTTTTTTTGTGTGTACT
TTACAAAAAAAAAACACTGTGTGGGACTTTTCCCCCTCCTTTTTTGGGGC
TAAACACCTCTCTTACGTTCCAG

Query= MSMg01no343_d22.b1 MSMg01no343_d22.b1 CHROMAT_FILE:
MSMg01no343_d22.b1 PHD_FILE: MSMg01no343_d22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:33:00 2005
         (463 letters)



>mm_chr1_146537325_146538190
          Length = 866

 Score =  833 bits (431), Expect = 0.0
 Identities = 454/463 (98%), Gaps = 3/463 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcttctgaggaattgtgtttggctttactgtaccagaataaatatttaatgacac 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcttctgaggaattgtgtttggctttactgtaccagaataaatatttaatgacac 263

                                                                       
Query: 64  gtttctgaatcttattagtttctctagtggggatgaaggtaagaagctattttccagaac 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gtttctgaatcttattagtttctctagtggggatgaaggtaagaagctattttccagaac 323

                                                                       
Query: 124 atgtgagaggtgcagataaggcagtgcatacatgctgcagttgagaaaaagatacagggc 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 atgtgagaggtgcagataaggcagtgcatacatgctgcagttgagaaaaagatacagggc 383

                                                                       
Query: 184 aggtttctcaacactaaactcactctatccatttcctacttttcagtaccagggtaagtc 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aggtttctcaacactaaactcactctatccatttcctacttttcagtaccagggtaagtc 443

                                                                       
Query: 244 ctactttatatcaaacaaatgatgctacttctt---tctgatatgtcttaaaatgagctg 300
           |||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||
Sbjct: 444 ctactttatatcaaacaaatgatgctacttcttctttctgatatgtcttaaaatgagctg 503

                                                                       
Query: 301 taatgggttaactaaattacagtgtttataaggcaacagacattcattcaaaaatgcata 360
           |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 504 taatgggttaactaaattacagtgtttataaggcaacaaacactcattcaaaaatgcata 563

                                                                       
Query: 361 agctataaaggctgcctttcttgggtattctaggaaagataattctttgctttactggga 420
           |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 564 agctataaaggctggctttcttgggtattctaggaaagataattctttgctttaatggga 623

                                                      
Query: 421 cagattttggaatttcgttctacctttggaccttgaaatctgt 463
           ||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 624 cagattttggaatttagttctacctttggatcttgaaatctgt 666


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 463
Length of database: 866
Length adjustment: 10
Effective length of query: 453
Effective length of database: 856
Effective search space:   387768
Effective search space used:   387768
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)