Query= MSMg01no346_h10.b1 MSMg01no346_h10.b1 CHROMAT_FILE:
MSMg01no346_h10.b1 PHD_FILE: MSMg01no346_h10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:37:10 2005
(453 letters)
>mm_chr1_134962029_134962881
Length = 853
Score = 853 bits (441), Expect = 0.0
Identities = 447/449 (99%)
Strand = Plus / Plus
Query: 5 gaattccatcatagcgccacacattaggaaggttgaggaccactgacttaggcagtgcta 64
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccatcagagcgccacacattaggaaggttgaggaccactgacttaggcagtgcta 264
Query: 65 gtaatggaagccaaggcgtcatgcatgctggacagacagacactctcccatggagtctgg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gtaatggaagccaaggcgtcatgcatgctggacagacagacactctcccatggagtctgg 324
Query: 125 ccctagacaactgtcctctttgactgaagagaccctcccctttactgatgataagtacct 184
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ccctaggcaactgtcctctttgactgaagagaccctcccctttactgatgataagtacct 384
Query: 185 gtttttgaaggactcgtgaacgctgtcctctgatctccacatatgtccgtggcattcatg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gtttttgaaggactcgtgaacgctgtcctctgatctccacatatgtccgtggcattcatg 444
Query: 245 ccttcccctaagagcaaacaaataaatgattgttaagaggaataaaccaaggacctcttt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ccttcccctaagagcaaacaaataaatgattgttaagaggaataaaccaaggacctcttt 504
Query: 305 ctttccttggagcacacatgatggaaagaaggataggaattagaaccagaggtggaggca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ctttccttggagcacacatgatggaaagaaggataggaattagaaccagaggtggaggca 564
Query: 365 tatagaaggtgggctggatagccacagtaaagttgccctggtctctcttttcctctatct 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tatagaaggtgggctggatagccacagtaaagttgccctggtctctcttttcctctatct 624
Query: 425 ttctgtttttttacccctgttgtgggcat 453
|||||||||||||||||||||||||||||
Sbjct: 625 ttctgtttttttacccctgttgtgggcat 653
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 453
Length of database: 853
Length adjustment: 10
Effective length of query: 443
Effective length of database: 843
Effective search space: 373449
Effective search space used: 373449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no346_h10.g1 MSMg01no346_h10.g1 CHROMAT_FILE:
MSMg01no346_h10.g1 PHD_FILE: MSMg01no346_h10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:37:10 2005
(511 letters)
>mm_chr1_135116357_135117267
Length = 911
Score = 903 bits (467), Expect = 0.0
Identities = 501/519 (96%), Gaps = 12/519 (2%)
Strand = Plus / Minus
Query: 5 cagccgttcagaccccagaagtccctaccatgctgaagtggccacacctcacccatttat 64
|||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 911 cagctgttcagaccccagaagtccctaccatgctgaagtggccacacctcagccatttat 852
Query: 65 tccatgggcgcgtcctaagcagccacggtgaggcatctccatccttgacatggatacaga 124
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 851 tccatgggcatgtcctaagcagccacggtgaggcatctccatccttgacatggatacaga 792
Query: 125 caaaagaaatgaaggaaacatcctctcactgggggcaatagtgacagctagaggggtggg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 caaaagaaatgaaggaaacatcctctcactgggggcaatagtgacagctagaggggtggg 732
Query: 185 gccaaga-------a-----acatcgtggaagcagtgaagaggcacaagcacattgcagg 232
||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 gccaagaggtgctcaggtgtacatcgtggaagcagtgaagaggcacaagcacattgcagg 672
Query: 233 gtaggggtaacagagggtgacagagggcaataggcatggacactgcactctgctggacat 292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 gtaggggtaacagagggtgacagagggcaataggcatggacactgcactctgctggacat 612
Query: 293 gctccacagttaggaccaccgtcaatccccacacaggagcgctgggaaggcactgggagg 352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 gctccacagttaggaccaccgtcaatccccacacaggagcgctgggaaggcactgggagg 552
Query: 353 ccactgtgggtcccacagtgtagatgacatacaaaatgccttctgctcagtgctagtgtc 412
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 551 ccactgtgggtcccacagtgtagatgacatacaaaatgccttctgctcagtgctagcgtc 492
Query: 413 tcatgcatcagtagacctccgctgccggtgtgctccctccccacaggaagaattggctcc 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 tcatgcatcagtagacctccgctgccggtgtgctccctccccacaggaagaattggctcc 432
Query: 473 atcaagggcagctagagcgctgagatattttcctaactt 511
|||||||||||||| ||||||||||||||||||||||||
Sbjct: 431 atcaagggcagctaaagcgctgagatattttcctaactt 393
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 911
Length adjustment: 10
Effective length of query: 501
Effective length of database: 901
Effective search space: 451401
Effective search space used: 451401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
