NNCCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCTTTGTTCTTTCCTGAGCCCCATTTTTTAATGGGGTTGTTCGA
TTTTCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGCC
CCCTATCTGATTTAGGATAGGTAAAAATCTTTTCCCAATCTGTTGGTGGT
CTTTTTGTCTTATTGACGGTGTCTTTTGCCTTTCAGAAACTTTGGAGTTT
CATTAGATCCCATTTGTCAATTCTCGATCTTACAGCACATGCCATTGCTG
TTCTGTTCAGGAATTTTTCCCATGTGTCCTTATCTTCAAGGCTTTTCCCC
ACTTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCTTT
GATCCACTTAGATTTGACCTTACTACAAGGAGATAAGTATGGATCGATTC
GCATTCTTCTACATGATAACCACCAATTGTGCCAGCACCAATTGTTGAAC
ATGCTGTCTTTCTTCCACTGGATGGGTTTAGCTCCCTTGTTGAACATCTA
GTGACCCTATTGGGGTAGCGTCATTTCTGGGTTTTCAATTTCTATCCATT
TGCTGGCCTGTTTCGTTCTTTCTCCCTACCATGCCCTCTTTTACCCCATC
ATGCTCCTAATAATTACNNNNTCAGNCCTCCGCTTCTCGCCTTCCCCCTT
CAGNAAGANCAANAAATATTTCATTTCACTTCTTTTTTGATTACCACGCC
ATTATCTGAATTTTTTCCAACCGCCATTTACTCTCCTATTCTTTCTCTCT
TC

NNNNAACAATGCAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCACACGCTCCAGGCACAAGC
TCAGGTCGTTCACAGATAGGCTGACAGGTCCCATCAGGAGGAACAGTCCA
GCCTGGCAGGCAGCCCATGCATGCAGCCTCACTGCTGCATGCTCAGGTAA
GGCAGTAACCAAGTGGGTTTCACAGGGCCTGTGGCCGCACAGCTTCCTGC
AATACATACATACATACATACATACATACATACATACATACATACATACA
TACATACGTAAATAAATAAATAATGTAGATATGCTTCACTTTAAGTCCAA
GGAAAAATTGGCTTCTAAACATTTTGAGCATTTCAGCCTACTTGATTAGT
AGAAACCATAGCGTTAGAGGCCAATTAGATATATAATTTGAAGACACTTT
TGTGATAGTTAATCTTGATTTCTAACCCTGAAAGATCTGTCATCATCTAA
ATGAGATGCCTCTTGGTGGGTCATTGAGAATGGGTGGGTTAGAAAGAATT
AGCACTCCCCCATAGAGGGAAGTAAATTTATGCAGGAAGCTGGGATAAAA
AGAACCTCCAAAATAACGCAAGGCTGATTGTCTAATTCCCATCTTGCCTT
TGAGCCAATCTTACCTTTGTTTCTGCAAATGCTGGGGCATTTGAAGCTGA
AGCCGGGGCTGCTCTTATACTTGTGAAGTGGGGGTTGCACCGGCCCCTCA
GCTAAATAAN

Query= MSMg01no347_h21.g1 MSMg01no347_h21.g1 CHROMAT_FILE:
MSMg01no347_h21.g1 PHD_FILE: MSMg01no347_h21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:38:29 2005
         (449 letters)



>mm_chr1_115464902_115465750
          Length = 849

 Score =  822 bits (425), Expect = 0.0
 Identities = 440/449 (97%), Gaps = 8/449 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   cacacgctccaggcacaagctcaggtcgttcacagataggctgacaggtcccatcaggag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 cacacgctccaggcacaagctcaggtcgttcacagataggctgacaggtcccatcaggag 268

                                                                       
Query: 61  gaacagtccagcctggcaggcagcccatgcatgcagcctcactgctgcatgctcaggtaa 120
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 269 gaacagtccagcctggcaggcagcccatgcatgcagcctcattgctgcatgctcaggtaa 328

                                                                       
Query: 121 ggcagtaaccaagtgggtttcacagggcctgtggccgcacagcttcctgcaatacataca 180
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||   
Sbjct: 329 ggcagtaaccaagtgggtttcacagggcctgtggccgcacagcttcctgcaatacat--- 385

                                                                       
Query: 181 tacatacatacatacatacatacatacatacatacatacatacatacgtaaataaataaa 240
              ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 ---at--atacatacatacatacatacatacatacatacatacatacgtaaataaataaa 440

                                                                       
Query: 241 taatgtagatatgcttcactttaagtccaaggaaaaattggcttctaaacattttgagca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taatgtagatatgcttcactttaagtccaaggaaaaattggcttctaaacattttgagca 500

                                                                       
Query: 301 tttcagcctacttgattagtagaaaccatagcgttagaggccaattagatatataatttg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tttcagcctacttgattagtagaaaccatagcgttagaggccaattagatatataatttg 560

                                                                       
Query: 361 aagacacttttgtgatagttaatcttgatttctaaccctgaaagatctgtcatcatctaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aagacacttttgtgatagttaatcttgatttctaaccctgaaagatctgtcatcatctaa 620

                                        
Query: 421 atgagatgcctcttggtgggtcattgaga 449
           |||||||||||||||||||||||||||||
Sbjct: 621 atgagatgcctcttggtgggtcattgaga 649


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 11
Number of successful extensions: 11
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 1
Length of query: 449
Length of database: 849
Length adjustment: 10
Effective length of query: 439
Effective length of database: 839
Effective search space:   368321
Effective search space used:   368321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)