XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTT
GTTTAGCTCTGTACGCTATCTCTTAATAGGATTATTTGATTTTCTGGAGT
CCAACTTCTTGAGTTCTTTATATATATTGGATAATTGTTCCCTATCTGAT
TTAGGATTGGTAAAGATCCTTTCCCAATCTGTTGGTTGCCTTTTTGTCTT
CTTGACAGTGTCTTTTGCCTTACAGAAGCTTTGCAATTTTATGAGGTCCT
ATTTGTCAATTCTCGATCTTTCAGAATAAGCCATTGCTGTTCTGTTCAGG
AATTTTTCCCCTATGCCCATATCTTTAAGGCTTTTTCCCACCATCTCCTC
TATAAGATTCAGTATCTCTGGTTTTATGTGGAGCTCCTTGATCCACTTAG
ACTTGACCTTAGTACAAGGAGATAAGAATGGATCAATTCAAATTCTTCTA
CATGATAACCACCAGTTGTGCCAGCACCATTTGTTGAAAATGCTGTCTTT
TTTCCACTGGATGGTTTTAGCTCCCCTGTTAAAGGTCAAGTGACTATAGG
TTTGTGAATTCTTTTCTGGGTCTTCAATTCTATACCCTTGATCTACCTGC
CTTCTCACTTTACCAACACCATTCAGTTTTTTTTAATCCAATTGCCCTGT
AGTACAGCTTGANGTTAGGGATGGTGATACCCCAAAAAGTGTGGTTATTT
TTGAAATAGTTTTTGCTATTCTAGGGTTTTTT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXTTCAGTTATTTAATTTATAAAACTGATTTCAA
TTATTATAAATTATGATTTGCAAGATATATTCTTTTACAATAAAATGAAA
ATAAACCTTTTTATTTATTTCTTTATTGCTACTTATCAGTTATACAATTA
CACTTTTTCCAATATGTAAGGAACTATACTCAATTAAATAACATTTTCAT
GAAATATGTTTTAAAAACAATTAGATCTTATTCTTTAAAATATGGTTTTT
AAATTAGACCAAGATGCTGTTTATGCAAAACAGAGGCTGAGAGGATTAGA
AGAAAATTATGAAATATTGACACCTATAAACAGAAAACACCTAGATAGTG
TTATATATAAAGTGGATGCTCAGTGGTCATTAACTTTCTGAACATTTAAA
AAAAGAGACATTAAAGTGAATGATTAACCATAATGGCTTGTCATAAATTA
TAACATGTAAATGACTTTTGATAAATGATAACATGCAAAATAATGCAATA
TAGTGTATCTAANAGTATTAGATTGTCTGTCTATTGATGTATTTCAGNGT
TTTTAAATTTCTGAAAATTCTCTTACTTCTTCCATACCCTGGCATCATAC
CCTTGCAAGCAGAAATANGAACCCCTCCTTAAGTCTTGTTAGTTCACAAC
ATGATAATAAAAAAGCTTTTGTTTTACTATTTAAAAATCAGACTTTTATA

Query= MSMg01no348_c09.g1 MSMg01no348_c09.g1 CHROMAT_FILE:
MSMg01no348_c09.g1 PHD_FILE: MSMg01no348_c09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:39:21 2005
         (485 letters)



>mm_chr1_50085210_50086094
          Length = 885

 Score =  884 bits (457), Expect = 0.0
 Identities = 478/485 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttcagttatttaatttataaaactgatttcaattattataaattatgatttgcaagatat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcagttatttaatttataaaactgatttcaattattataaattatgatttgcaagatat 260

                                                                       
Query: 61  attcttttacaataaaatgaaaataaacctttttatttatttctttattgctacttatca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 261 attcttttacaataaaatgaaaataaacctttttatttatttctttattgctagttatca 320

                                                                       
Query: 121 gttatacaattacactttttccaatatgtaaggaactatactcaattaaataacattttc 180
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gctatacaattacactttttccaatatgtaaggaactatactcaattaaataacattttc 380

                                                                       
Query: 181 atgaaatatgttttaaaaacaattagatcttattctttaaaatatggtttttaaattaga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgaaatatgttttaaaaacaattagatcttattctttaaaatatggtttttaaattaga 440

                                                                       
Query: 241 ccaagatgctgtttatgcaaaacagaggctgagaggattagaagaaaattatgaaatatt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 441 ccaagatgctgtttatgcaaaacagaggctgagaggattagaagaaaattatgaaatgtt 500

                                                                       
Query: 301 gacacctataaacagaaaacacctagatagtgttatatataaagtggatgctcagtggtc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gacacctataaacagaaaacacctagatagtgttatatataaagtggatgctcagtggtc 560

                                                                       
Query: 361 attaactttctgaacatttaaaaaaagagacattaaagtgaatgattaaccataatggct 420
           |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||
Sbjct: 561 attaactttctgaatattttaaaaaagagacattaaagtgaatgattaaccataatgact 620

                                                                       
Query: 421 tgtcataaattataacatgtaaatgacttttgataaatgataacatgcaaaataatgcaa 480
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgtcataaatgataacatgtaaatgacttttgataaatgataacatgcaaaataatgcaa 680

                
Query: 481 tatag 485
           |||||
Sbjct: 681 tatag 685


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 485
Length of database: 885
Length adjustment: 10
Effective length of query: 475
Effective length of database: 875
Effective search space:   415625
Effective search space used:   415625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)