Query= MSMg01no349_c05.b1 MSMg01no349_c05.b1 CHROMAT_FILE:
MSMg01no349_c05.b1 PHD_FILE: MSMg01no349_c05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:40:40 2005
(570 letters)
>mm_chr1_196322949_196323918
Length = 970
Score = 1071 bits (554), Expect = 0.0
Identities = 563/566 (99%)
Strand = Plus / Plus
Query: 5 gaattcactattcatttgctttctaaacatacggtgccttctttagaaagttactcccta 64
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcactattcatttgttttctaaacatacggtgccttctttagaaagttactcccta 264
Query: 65 gagataaaatatttagaggctgatttgaagcttagcaagttgcctacctttacaaccagg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gagataaaatatttagaggctgatttgaagcttagcaagttgcctacctttacaaccagg 324
Query: 125 catccaaagttaaaaccagaaactgagttcaaaggtggattactttctgaagcaaactta 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 catccaaagttaaaaccagaaactgagttcaaaggtggattactttctgaagcaaactta 384
Query: 185 agctttagttaagcttctactcaacattaactgagaatgatatatacgtatgagaagtta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agctttagttaagcttctactcaacattaactgagaatgatatatacgtatgagaagtta 444
Query: 245 tccctgttcagaaataagcctatgtctccagttaccttgaggctccaaaattcagtatct 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tccctgttcagaaataagcctatgtctccagttaccttgaggctccaaaattcagtatct 504
Query: 305 ctaatctacaggagtgcattgactggcgcccacagagatatcatgtagcatagaattcca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ctaatctacaggagtgcattgactggcgcccacagagatatcatgtagcatagaattcca 564
Query: 365 gggggttttcctaaggcttggagcattcctctatagcaaggtcactgctctaagtatcat 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gggggttttcctaaggcttggagcattcctctatagcaaggtcactgctctaagtatcat 624
Query: 425 tagcatggcaataaagaacatatgcacaaaaagttcagtgtggagccaaaggtgaactga 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tagcatggcaataaagaacatatgcacaaaaagttcagtgtggagccaaaggtgaactga 684
Query: 485 attttttcttatagttcccagtctacgtagcactgtgtgggagtgtagaggattgggtgg 544
||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 685 attttttcttaaagttcccagtctacctagcactgtgtgggagtgtagaggattgggtgg 744
Query: 545 gggtatagagaacatggagaagtgga 570
||||||||||||||||||||||||||
Sbjct: 745 gggtatagagaacatggagaagtgga 770
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 570
Length of database: 970
Length adjustment: 10
Effective length of query: 560
Effective length of database: 960
Effective search space: 537600
Effective search space used: 537600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no349_c05.g1 MSMg01no349_c05.g1 CHROMAT_FILE:
MSMg01no349_c05.g1 PHD_FILE: MSMg01no349_c05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:40:40 2005
(491 letters)
>mm_chr1_196500729_196501619
Length = 891
Score = 816 bits (422), Expect = 0.0
Identities = 444/456 (97%), Gaps = 9/456 (1%)
Strand = Plus / Minus
Query: 44 cacacacacacacacacacacaccacacacacacacacacacacacaaacacacacacaa 103
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 536 cacacacacacacacacacaca-cacacacacacacacacacacacaaacacacacacaa 478
Query: 104 aacagcagactcattggtttgatgggctctacaaacacaattagaccttagcagaactgc 163
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 aacagcagactcattggtttgatgggctctacaaacacaattagaccttagcagaactgc 418
Query: 164 catcaggaacctaattcctccagttcccgacccttggcaaacacgacttggctttttaaa 223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 catcaggaacctaattcctccagttcccgacccttggcaaacacgacttggctttttaaa 358
Query: 224 gctgctgctttatttattcccgttgatctgtttctgaagatt--------aaaaaaaaaa 275
|||||||||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 357 gctgctgctttatttattcctgttgatctgtttctgaagattaaaaaaaaaaaaaaaaaa 298
Query: 276 aaactattgcttttgacccattacgttaaaacaataacgggtcttatatccaagttccag 335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 aaactattgcttttgacccattacgttaaaacaataacgggtcttatatccaagttccag 238
Query: 336 ctgataccaagaggaatgagcaggtcaagggagcctcatgctgagggactggtacaggtg 395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 ctgataccaagaggaatgagcaggtcaagggagcctcatgctgagggactggtacaggtg 178
Query: 396 agaatggaatcctttgtggctttacagcaggtaccatatcttgcgggtggatggtagaac 455
||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||
Sbjct: 177 agaatggaatcctttgtggctttacagtaggtaccatatcttgtgggtggatggtagaac 118
Query: 456 atatatagaaagcaggtatcaggtttaactgccatt 491
||||||||||||||||||||||||||||||||||||
Sbjct: 117 atatatagaaagcaggtatcaggtttaactgccatt 82
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 86
Number of extensions: 23
Number of successful extensions: 22
Number of sequences better than 10.0: 1
Number of HSP's gapped: 21
Number of HSP's successfully gapped: 1
Length of query: 491
Length of database: 891
Length adjustment: 10
Effective length of query: 481
Effective length of database: 881
Effective search space: 423761
Effective search space used: 423761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
