NTTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTCACTGGTAACTAATGAGTTACCTCGCTGTTTACAGGTCTTTAG
ACTGTTAAGAGAACACATGGTATAAGAGCTGCACAAGCATCAAACTGGGG
CTGATACAAGAAGGCATTTACTTACTCTCCCCATCGGTCTAGGAGTCTGA
CTGGCAGAACAGACACAGGTATTCCATTCAGGTATTGATCATGGAGCATC
ATCTATATTGGGTGTAGCTGGGGGACTGCACATGTGGCCCTGGCGTGGCA
CCCTTCCCCTAGGTGTGCTGCAATTCAGATGCCCCTTGCACTCTTAGTGT
TCAATGGCTCCATAATACAAAACTGTAGCAGTAATGGTGGGGTGCTTCTA
TGTAAATGCTGGGGGGGGGGGTCAACTGCAAAAGCATCTCCTGCAGGAGG
ACCTAACTGAGCATGCCTGAGAGACCAAGAGCTGCTGGTGCAAACAATGG
CAGCCAATCAGGAACTGCTATTTAGAAGAGATGCTTTCTTGGGACCAATG
GGGGCATGGGTGGGGGGTATGAAAGGAGCTTGCAGCAGGGCTCAGTTGAG
CCGTTTCTCACCTGCTCCTATAGTCTGTGTCATACTCTATGCCACCTTCA
TCTCCAACACCTAAAGCAGGTAGGGCTGGGTGGTAAGTAATCCGGTGCAC
AGGCTCCTTATTTTCN

NCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTGTTCTGGGCTACTTGAGCGACAT
GGGTAGTGTGGCCACGTGTTCTGGGCCAGGAATCTGGCAGGGATCAGGGA
GACATCTACCCTCTCAGGTGGGTGCCTGGGTGCCAGGGTCTCAGACCCAC
TCGATTCAAGTTTCTTGGCATGGTTCTTTGTTGTACATCTTGTTAATCTC
AGATGGTGAGTGTTGCAGCTCTTATGAGATGAAGGCTGTGGTTTTCTTGC
TCACTTCTCTCGTCCATGAACAAAGATATTTTTGAGAGGTAACTATTTTC
AGCTGAAAGCAAACAGCCTTTTAAAAAGTGTCTCTGTTTCCTTAGGTGCA
GACATTTTGGAAATGCCAAATCGAAAATGCATATGCTCCCGTGGAAGAAG
CAAAGGGGGTTGATTTGCTAAGTGTGCATCTCTTTGTTGTGGCTCAGAGA
TCTGAGCGTGGTTTCTGGGAAACCAGGCAATGTGGAAATGAAAGAGATTC
TGTGTTTCGAATTGCTGAGCCACCACTGGGCTGTCAAACACAAACATAAG
TTTTGCCAATTTAAAGTGGAAGTCTGAGACGAAAGTCAGCTTGGAGTTAT
CTGGGGCTTCCTGCTGGTAACTGGTTTTTGGTTAGCTTCAACGAGTCGTT
GAAAGGAGTATATTTATGAGCTAACCCCCCTCTTATCCGCGTTTATGG

Query= MSMg01no349_e07.g1 MSMg01no349_e07.g1 CHROMAT_FILE:
MSMg01no349_e07.g1 PHD_FILE: MSMg01no349_e07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:40:50 2005
         (496 letters)



>mm_chr1_186397103_186397998
          Length = 896

 Score =  893 bits (462), Expect = 0.0
 Identities = 489/498 (98%), Gaps = 4/498 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tgttctgggctacttgagcgacatgggtagtgtggccacgtgttctgggccaggaatctg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 857 tgttctgggctacttgagcgacatgggtagtgtggccacgtgttctgggccaggaatctg 798

                                                                       
Query: 61  gcagggatcagggagaca-tctaccctctcaggtgggtgcctgggtgccagggtctcaga 119
           |||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||
Sbjct: 797 gcagggatcagggagacact-taccctctcaggtgggtgcctgcgtgccagggtctcaga 739

                                                                       
Query: 120 cccactcgattcaagtttcttggcatggttctttgttgtacatcttgttaatctcagatg 179
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 cccactcaattcaagtttcttggcatggttctttgttgtacatcttgttaatctcagatg 679

                                                                       
Query: 180 gtgagtgttgcagctcttatgagatgaaggctgtggttttcttgctcacttctc-tcgtc 238
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 678 gtgagtgttgcagctcttatgagatgaaggctgtggttttcttgctcacttctcgt-gtc 620

                                                                       
Query: 239 catgaacaaagatatttttgagaggtaactattttcagctgaaagcaaacagccttttaa 298
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 catgaacaaagatatttttaagaggtaactattttcagctgaaagcaaacagccttttaa 560

                                                                       
Query: 299 aaagtgtctctgtttccttaggtgcagacattttggaaatgccaaatcgaaaatgcatat 358
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 559 aaagtgtctctgtttccttaggtgcagacattttggaaatgccaaattgaaaatgcatat 500

                                                                       
Query: 359 gctcccgtggaagaagcaaagggggttgatttgctaagtgtgcatctctttgttgtggct 418
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 gctcccgtggaagaagcaaagggggttgatttgctaagtgtgcatctctttgttgtggct 440

                                                                       
Query: 419 cagagatctgagcgtggtttctgggaaaccaggcaatgtggaaatgaaagagattctgtg 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 cagagatctgagcgtggtttctgggaaaccaggcaatgtggaaatgaaagagattctgtg 380

                             
Query: 479 tttcgaattgctgagcca 496
           | ||||||||||||||||
Sbjct: 379 tctcgaattgctgagcca 362


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 496
Length of database: 896
Length adjustment: 10
Effective length of query: 486
Effective length of database: 886
Effective search space:   430596
Effective search space used:   430596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)