Query= MSMg01no349_o11.b1 MSMg01no349_o11.b1 CHROMAT_FILE:
MSMg01no349_o11.b1 PHD_FILE: MSMg01no349_o11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:41:39 2005
(208 letters)
>mm_chr1_108597427_108598033
Length = 607
Score = 387 bits (200), Expect = e-112
Identities = 206/208 (99%), Gaps = 1/208 (0%)
Strand = Plus / Plus
Query: 1 tctttgttttcacatagaaaaaattctgtgacagccgccttccataactgaattctgctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctttgttttcacatagaaaaaattctgtgacagccgccttccataactgaattctgctc 260
Query: 61 aaagaaatgttgatgggctgatcttttaaaagggggttattccactgtgaactctaggcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 261 aaagaaatgttgatgggctgatcttttaaaagggggttattccactgtgaattctaggcc 320
Query: 121 ttcaaccagacactgctggtttaagagaattatgagatgaggcaagactcacaaagaact 180
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 321 ttcaaccagacactgctggtttaagagaat-atgagatgaggcaagactcacaaagaact 379
Query: 181 aaaacaacagccacagctggttaaaaat 208
||||||||||||||||||||||||||||
Sbjct: 380 aaaacaacagccacagctggttaaaaat 407
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 208
Length of database: 607
Length adjustment: 9
Effective length of query: 199
Effective length of database: 598
Effective search space: 119002
Effective search space used: 119002
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no349_o11.g1 MSMg01no349_o11.g1 CHROMAT_FILE:
MSMg01no349_o11.g1 PHD_FILE: MSMg01no349_o11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:41:39 2005
(248 letters)
>mm_chr1_108771758_108772406
Length = 649
Score = 474 bits (245), Expect = e-138
Identities = 248/249 (99%), Gaps = 1/249 (0%)
Strand = Plus / Minus
Query: 1 aggacaaacttccaccatgattctaggtttggctttgttctccatttacattcgcctaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 aggacaaacttccaccatgattctaggtttggctttgttctccatttacattcgcctaag 390
Query: 61 gccttttgtcctttttccga-ttttttataaagttgtaagaatttttagttggaagtaga 119
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 389 gccttttgtcctttttccgatttttttataaagttgtaagaatttttagttggaagtaga 330
Query: 120 ttcaaggatcgtctttccatctccagactttcaaacctgccttcatcgcttgccaaagcc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 ttcaaggatcgtctttccatctccagactttcaaacctgccttcatcgcttgccaaagcc 270
Query: 180 cataatataaaaggaacagctgggcctctaccagagcctgtgggcctgtggcagcttgtc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 cataatataaaaggaacagctgggcctctaccagagcctgtgggcctgtggcagcttgtc 210
Query: 240 agagagcaa 248
|||||||||
Sbjct: 209 agagagcaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 649
Length adjustment: 9
Effective length of query: 239
Effective length of database: 640
Effective search space: 152960
Effective search space used: 152960
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
