Query= MSMg01no350_b02.b1 MSMg01no350_b02.b1 CHROMAT_FILE:
MSMg01no350_b02.b1 PHD_FILE: MSMg01no350_b02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:41:52 2005
(546 letters)
>mm_chr1_84396324_84397269
Length = 946
Score = 735 bits (380), Expect = 0.0
Identities = 411/424 (96%), Gaps = 7/424 (1%)
Strand = Plus / Minus
Query: 11 ttcaaagtcagtctggactacataagaccctatctcaacagggacagcattctaatgcaa 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 ttcaaagtcagtctggactacataagaccctatctcaacagggacagcattctaatgcaa 359
Query: 71 ctcctttccaaagtttttaggtcggcatcccaggtttttc-agtcctgtccttgagtgtt 129
||||||||||||||| |||||||||||||||||| ||||| || ||||||||||||||||
Sbjct: 358 ctcctttccaaagttattaggtcggcatcccagg-ttttcaagccctgtccttgagtgtt 300
Query: 130 actttgcttcaccaactgcgttcctttatggaattttccaactagacattatttgttttg 189
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 299 actttgcttcaccaactgcgttcctttatggaattttccaactagacatta-----tttg 245
Query: 190 ttttgttttgtttttttccttttaaactttgtttcattagttacaaaggccatctgtttc 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 ttttgttttgtttttttccttttaaactttgtttcattagttacaaaggccatctgtttc 185
Query: 250 ctttcatcaaactgcttttgaaccttggtcaaaaatcagttgggaatatttgtgttggtc 309
|||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 184 ctttcatcgaactgcttttgaaccttggtcaaaaatcagttggcaatatttgtgttggtc 125
Query: 310 tattttgagttcttttttcttttttgttgatcgatgtgcctgttcaattgccaatacagc 369
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 tattttgagttctttcttcttttttgttgatcgatgtgcctgttcaattgccaatacagc 65
Query: 370 cttgacatctaaaatctactgtagctacatgacttttaaaagtggacaggtgaactctta 429
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 64 cttgacatctaaaatctactgtagctacatgacttttaaaagtggacaggtggactctta 5
Query: 430 ctac 433
||||
Sbjct: 4 ctac 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 546
Length of database: 946
Length adjustment: 10
Effective length of query: 536
Effective length of database: 936
Effective search space: 501696
Effective search space used: 501696
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no350_b02.g1 MSMg01no350_b02.g1 CHROMAT_FILE:
MSMg01no350_b02.g1 PHD_FILE: MSMg01no350_b02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:41:53 2005
(431 letters)
>mm_chr1_84206587_84207418
Length = 832
Score = 760 bits (393), Expect = 0.0
Identities = 423/433 (97%), Gaps = 3/433 (0%)
Strand = Plus / Plus
Query: 1 tgtcccta-tcgcatcttggtcatgctcaaaatacagatggacattctcagttccgctag 59
|||||||| | |||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 tgtccctact-gcatcttggtcatgctcaaaatacagatggacattcccagttccgctag 259
Query: 60 catccaacttagggtttgtgcatctttcctttgtc-tatctgggagacaaatgctttctg 118
||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||
Sbjct: 260 catccaacttagggtttgtgcatctttccttcgtcaaatctgggagactaatgctttctg 319
Query: 119 cagggtagatgctcaaaatacccttcagatgtgatttgctctatccctgatcagaaataa 178
|||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||
Sbjct: 320 cagggtagatgctcaaaatacccttcagatatgatttgctctatccctgatctgaaataa 379
Query: 179 tgataaataccaagataatgactgcttggatattactgtaatagtctacaattcagacct 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tgataaataccaagataatgactgcttggatattactgtaatagtctacaattcagacct 439
Query: 239 gttggaacaagaggacctaaggtagtgaacagtattggaagccattacagcatgaaaaca 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gttggaacaagaggacctaaggtagtgaacagtattggaagccattacagcatgaaaaca 499
Query: 299 gggtttaatagatttgctaaacatctactcccttcttaaccttaggaaagctctccctgc 358
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 500 gggtttaatagatttgctaaacatctactcccttcttaatcttaggaaagctctccctgc 559
Query: 359 tggaactgataaactggtcaactttagaatgatcagcgggattcaggtccacatatatgt 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tggaactgataaactggtcaactttagaatgatcagcgggattcaggtccacatatatgt 619
Query: 419 ctgttgtttattg 431
|||||||||||||
Sbjct: 620 ctgttgtttattg 632
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 431
Length of database: 832
Length adjustment: 9
Effective length of query: 422
Effective length of database: 823
Effective search space: 347306
Effective search space used: 347306
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
