Query= MSMg01no350_d06.b1 MSMg01no350_d06.b1 CHROMAT_FILE:
MSMg01no350_d06.b1 PHD_FILE: MSMg01no350_d06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:42:03 2005
(485 letters)
>mm_chr1_27992072_27992956
Length = 885
Score = 584 bits (302), Expect = e-171
Identities = 330/340 (97%), Gaps = 3/340 (0%)
Strand = Plus / Minus
Query: 148 tatatctaaggctgaagaatcatttcaaaagagggaaagaaatgtt--taagggctagat 205
|||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||
Sbjct: 885 tatatctaaggctgaagaataatttcaaaagagggaaagaaatgtttataagggctagat 826
Query: 206 aattatcaactgtgctgtaaatctgcttcctagactcatagtttctcaccagtatgacag 265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 825 aattatcaactgtgctgtaaatctgcttcctagactcatagtttctcaccagtatgacag 766
Query: 266 tctaatccataatctgaagatggaaaataacagatgagccaaagcagaggaagaaaagtc 325
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 tctaa-ccataatctgaagatggaaaataacagatgagccaaagcagaggaagaaaagtc 707
Query: 326 caggaggccccaaccttacacccacattatgtaaatttcagtaaggtatttatctgtggc 385
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 706 caggaggccccaaccttacacccacattatgtaaatttcagcaaggtatttatctgtggc 647
Query: 386 tttttatagtgaggaattgactcactggagtgactgtgatttactcatgtcactcaaatg 445
|||||||||||| |||||||||||||||| ||||||||| |||||||||||| |||||||
Sbjct: 646 tttttatagtgaagaattgactcactggaatgactgtgaattactcatgtcagtcaaatg 587
Query: 446 gttttttggtctttcagtgagctattaagaaaatgatact 485
|||||||||||||||||||||||||||||||||||||||
Sbjct: 586 tttttttggtctttcagtgagctattaagaaaatgatact 547
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 485
Length of database: 885
Length adjustment: 10
Effective length of query: 475
Effective length of database: 875
Effective search space: 415625
Effective search space used: 415625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no350_d06.g1 MSMg01no350_d06.g1 CHROMAT_FILE:
MSMg01no350_d06.g1 PHD_FILE: MSMg01no350_d06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:42:03 2005
(427 letters)
>mm_chr1_27860462_27861288
Length = 827
Score = 803 bits (415), Expect = 0.0
Identities = 424/427 (99%)
Strand = Plus / Plus
Query: 1 acttggacaactggatccttttacggcaaagctttcattgcttcaacataaggaagaccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acttggacaactggatccttttacggcaaagctttcattgcttcaacataaggaagaccc 260
Query: 61 cgaacctggaaaatggcactgcttatatagcctgcagcgtgacgtttcagtacctgatgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cgaacctggaaaatggcactgcttatatagcctgcagcgtgacgtttcagtacctgatgt 320
Query: 121 ggcgtgacagcacctgattagttgctcgcccatcaccccattactaagccccaagatggg 180
|||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||
Sbjct: 321 ggcgtgacagcacctgattagttgcttgcccatcaccccattactacgccccaagatggg 380
Query: 181 aagtgattgggtttgaattcactcttgtacttgtgcataagtcttgtttactagttaggc 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagtgattgggtttgaattcactcttgtacttgtgcataagtcttgtttactagttaggc 440
Query: 241 gcagtggaagtcagcaccatcttataatggcaattgctcacagcacggctctccacagta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcagtggaagtcagcaccatcttataatggcaattgctcacagcacggctctccacagta 500
Query: 301 tattaataagatgtatatacagtacatgtatataatgcagtttacacagatcttctctat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tattaataagatgtatatacagtacatgtatataatgcagtttacacagatcttctctat 560
Query: 361 gtcagttacttactagttaatcttagttacatttttagttactaagttttacttcctagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtcagttacttactagttaatcttagttacatttttagttactaagttttacttcctagt 620
Query: 421 ttttcag 427
|||||||
Sbjct: 621 ttttcag 627
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 427
Length of database: 827
Length adjustment: 9
Effective length of query: 418
Effective length of database: 818
Effective search space: 341924
Effective search space used: 341924
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
