Query= MSMg01no351_e19.b1 MSMg01no351_e19.b1 CHROMAT_FILE:
MSMg01no351_e19.b1 PHD_FILE: MSMg01no351_e19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:43:30 2005
(226 letters)
>mm_chr1_133962726_133963354
Length = 629
Score = 362 bits (187), Expect = e-104
Identities = 201/207 (97%), Gaps = 3/207 (1%)
Strand = Plus / Minus
Query: 5 gaattctcagacgtaactctccttgtgcctattagcactttgtgggtctgggatagaatc 64
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gaattctcagacgaaagtctccttgtgcctattagcactttgtgggtctgggatagaatc 324
Query: 65 ggatatacaggaattctgaaaatatgttcagctagaaaattcatgaaaaggaggaggggg 124
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ggatatataggaattctgaaaatatgttcagctagaaaattcatgaaaaggaggaggggg 264
Query: 125 tatctctgaatgtcagaggaggggccc---tgttgtttggaagtgctgggagggggtccg 181
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 263 tatctctgaatgtcagaggaggggccctgttgttgtttggaagtgctgggagggggtccg 204
Query: 182 ttgttgttgtttgttgttgttgttgtt 208
|||||||||||||||||||||||||||
Sbjct: 203 ttgttgttgtttgttgttgttgttgtt 177
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 226
Length of database: 629
Length adjustment: 9
Effective length of query: 217
Effective length of database: 620
Effective search space: 134540
Effective search space used: 134540
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no351_e19.g1 MSMg01no351_e19.g1 CHROMAT_FILE:
MSMg01no351_e19.g1 PHD_FILE: MSMg01no351_e19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:43:31 2005
(450 letters)
>mm_chr1_133813033_133813882
Length = 850
Score = 862 bits (446), Expect = 0.0
Identities = 449/450 (99%)
Strand = Plus / Plus
Query: 1 agtgaatctgctgaaaatcaccacatgcctccctatcactattaaaatctagtaataatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtgaatctgctgaaaatcaccacatgcctccctatcactattaaaatctagtaataatt 260
Query: 61 tggttttgtttgtttgttttttaagacagctgtggctgacttcacacacttacaacaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggttttgtttgtttgttttttaagacagctgtggctgacttcacacacttacaacaaca 320
Query: 121 taatcctgatgtttcctccacccagaaactgagacattcatgtttccttatgttggagat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taatcctgatgtttcctccacccagaaactgagacattcatgtttccttatgttggagat 380
Query: 181 tttctttctggtacaaagtttttagacttgttaggatggaactcccattgacttaaatga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttctttctggtacaaagtttttagacttgttaggatggaactcccattgacttaaatga 440
Query: 241 tgaaaattgttgtaatccaattgatggctctgaaatactgtttgggactaaaggagtcct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgaaaattgttgtaatccaattgatggctctgaaatactgtttgggactaaaggagtcct 500
Query: 301 tcagtggttaagagcacttcaatcactgaggttcatttcccagtacctacatggtagtgg 360
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcagtggttaagagcacttcaatgactgaggttcatttcccagtacctacatggtagtgg 560
Query: 361 ctcacataactccataactccagtttcaggaaatcttgtttccctcttctgaactctgat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctcacataactccataactccagtttcaggaaatcttgtttccctcttctgaactctgat 620
Query: 421 taataaataaaatgactagacttctcaacc 450
||||||||||||||||||||||||||||||
Sbjct: 621 taataaataaaatgactagacttctcaacc 650
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 450
Length of database: 850
Length adjustment: 10
Effective length of query: 440
Effective length of database: 840
Effective search space: 369600
Effective search space used: 369600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
