TGGGGAATCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCTCACCTGAGGAATACCGAATGGCAGAGAAGCACTTGAA
AAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCC
TGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGT
GACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTG
TTGGTGGGAGTGCAGGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGT
TCCTCAGAAAACTGGACATAGTACTACCGGAGGATCCAGCAATACCTCTC
CTGGGCATATATCCAGAAGATGCCCCAACTGGTAAGAAGGACACATGCTC
CACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAATAAC
CTAGATGCCCCTCAACAGAAGAATGGATACAGAAAATGTGGTACATCTAC
ACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCT
AGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACATT
CACAAAGAAACTCACACAATATGTATTCACTGATAAGTGGATATTAGCCC
CAAACCTAGGATACCCAAGATATAAGATATAATTTGCTAAACCCATGGAA
CTCAAGAAGAATGAAGACTGAAGTGTGGACCCTATGCCCCCTCCTTAGAT
T

NNNNNNAACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGTAGATTCTTCCTCTG
TTTACAATGTCTGACTTTTCAACACATTGTTCACCTCAAAAGGCATAGTT
TCATCTTGTTCTACATTGGAAACAATCAGTCATTTTTTTTTCAGAAAGGG
CTTACAAATATAAAGAGTGAATAGTTAGAAATATGTGAAAATCTAGCACT
CTAAATGGCTGCATTTACTTTGATTAGTGCTAGCAGGGAATAGCTGTAGA
TGGTTAATAACTGATGTGTCCAATAGAGTGTTCTAGGAATCAGTGGTGAG
TATTGACCAGAATGCTAACTTAAGCGTGCTTCTGTCACCAGGAGATGCAT
GATCAGAAAGGATAGAATGAAGAAAGTGTATGTCAAAATTTTGTTAACTG
AAAGTTTTATATGGATTCACAATTGTTTTACTAATTATTTCTGTTACACC
ATGACTATCTGCTTCCCTAAAACACCAACATATAACATCAAAACTATAGT
GTCTCGCCGTTAAATTCTGAGAAAACTACTACTAGAAATTACTGANAANG
AGAATGTAGGGTTGTGTGTCCTATGTCAACTCCACCACAGGGCATGGCCT
CTTGTAAAAATGTGACACAGCCTTGCTAATGGGGGGCTGGACTGTAGGGG
AAACCCCAGAAACACTCCCGGGGGGAAAAAAAAACTGGGGCTGATAAAAA
GGAAGCTGT

Query= MSMg01no351_p21.g1 MSMg01no351_p21.g1 CHROMAT_FILE:
MSMg01no351_p21.g1 PHD_FILE: MSMg01no351_p21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:44:22 2005
         (513 letters)



>mm_chr1_115648969_115649879
          Length = 911

 Score =  917 bits (474), Expect = 0.0
 Identities = 502/512 (98%), Gaps = 2/512 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   agtagattcttcctctgtttacaatgtctgacttttcaacacattgttcacctcaaaagg 60
           ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtagattcttcct--gtttacaatgtctgacttttcaacacattgttcacctcaaaagg 258

                                                                       
Query: 61  catagtttcatcttgttctacattggaaacaatcagtcatttttttttcagaaagggctt 120
           ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||
Sbjct: 259 catagtttcatcttgttctacattggaaacaatcagtcattttttttccagagagggctt 318

                                                                       
Query: 121 acaaatataaagagtgaatagttagaaatatgtgaaaatctagcactctaaatggctgca 180
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 319 acaaatataaagagtgaatagttaaaaatatgtgaaaatctagcactctaaatggctgca 378

                                                                       
Query: 181 tttactttgattagtgctagcagggaatagctgtagatggttaataactgatgtgtccaa 240
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tttacttcgattagtgctagcagggaatagctgtagatggttaataactgatgtgtccaa 438

                                                                       
Query: 241 tagagtgttctaggaatcagtggtgagtattgaccagaatgctaacttaagcgtgcttct 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tagagtgttctaggaatcagtggtgagtattgaccagaatgctaacttaagcgtgcttct 498

                                                                       
Query: 301 gtcaccaggagatgcatgatcagaaaggatagaatgaagaaagtgtatgtcaaaattttg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 gtcaccaggagatgcatgatcagaaaggatagaatgaagaaagtgtatgtcaaaattttg 558

                                                                       
Query: 361 ttaactgaaagttttatatggattcacaattgttttactaattatttctgttacaccatg 420
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 559 ttaactgaaagttttatatggattcacaattgttgtactaattatttctgttacaccatg 618

                                                                       
Query: 421 actatctgcttccctaaaacaccaacatataacatcaaaactatagtgtctcgccgttaa 480
           |||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||||
Sbjct: 619 actatctgcttccctaaagcagaaacatataacatcaaaactatagtgtctcgccgttaa 678

                                           
Query: 481 attctgagaaaactactactagaaattactga 512
           ||||||||||||||||||||||||||||||||
Sbjct: 679 attctgagaaaactactactagaaattactga 710


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 513
Length of database: 911
Length adjustment: 10
Effective length of query: 503
Effective length of database: 901
Effective search space:   453203
Effective search space used:   453203
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)