Query= MSMg01no352_e13.b1 MSMg01no352_e13.b1 CHROMAT_FILE:
MSMg01no352_e13.b1 PHD_FILE: MSMg01no352_e13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:44:46 2005
(513 letters)
>mm_chr1_73770200_73771112
Length = 913
Score = 946 bits (489), Expect = 0.0
Identities = 507/517 (98%), Gaps = 8/517 (1%)
Strand = Plus / Plus
Query: 1 aacacaccagggtcaggagtggatactggccctaccaaaagccctcccataagacccttg 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 201 aacacaccagggtcaggagtggatactggccctacccaaagccctcccataagacccttg 260
Query: 61 ggccctagagagagtaaatgagcaaatgcagatgtgttgctgtgatgttccttctccagc 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtccctagagagagtaaatgagcaaatgcagatgtgttgctgtgatgttccttctccagc 320
Query: 121 cacattgggtgacaaggtgttagcaatgatgtcacctatgacactcattctgctcaaccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cacattgggtgacaaggtgttagcaatgatgtcacctatgacactcattctgctcaaccc 380
Query: 181 agcatctggcagaggtcatagcgtatgttctaaagggccaagaattatctcatagcaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agcatctggcagaggtcatagcgtatgttctaaagggccaagaattatctcatagcaaaa 440
Query: 241 acctctgatttttt----agaaaggactgtctctgggcctcaggaggctccactgattta 296
|||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acctctgatt----caacagaaaggactgtctctgggcctcaggaggctccactgattta 496
Query: 297 caccaccatgtaggggctcccacttgctctgaggctaaggagcctgcagacagagatatg 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 caccaccatgtaggggctcccacttgctctgaggctaaggagcctgcagacagagatatg 556
Query: 357 gcttaaaaactctgcaaagaatttaatgaataatagagaatgtgggtgaatgacctgtgc 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 gcttaaaaactctgcaaagaatttaatgaataatagagaatgtgggtgaatgacctgtgc 616
Query: 417 tgtcttcactatacttgaaagtcactgtaaaggtcttccactctgctcttcagatgtgta 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 tgtcttcactatacttgaaagtcactgtaaaggtcttccactctgctcttcagatgtgta 676
Query: 477 agtacaaatgatgcctgacacagagtggtcctcatag 513
|||||||||||||||||||||||||||||||||||||
Sbjct: 677 agtacaaatgatgcctgacacagagtggtcctcatag 713
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 513
Length of database: 913
Length adjustment: 10
Effective length of query: 503
Effective length of database: 903
Effective search space: 454209
Effective search space used: 454209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no352_e13.g1 MSMg01no352_e13.g1 CHROMAT_FILE:
MSMg01no352_e13.g1 PHD_FILE: MSMg01no352_e13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:44:46 2005
(336 letters)
>mm_chr1_73983525_73984260
Length = 736
Score = 613 bits (317), Expect = e-180
Identities = 331/336 (98%)
Strand = Plus / Minus
Query: 1 tctccctttcaagctgaaatgtgtaggcagggaaggtcagaggaggcagttcagcagggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 tctccctttcaagctgaaatgtgtaggcagggaaggtcagaggaggcagttcagcagggg 477
Query: 61 gagaaagggggctttggggctgattcttggtcacccaggcttcaccaccacacaacgtta 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 476 gagaaagggggctttggggctgattcttggtcacccaggcttcaccaccacacaccgtta 417
Query: 121 ccatgatgtgacctcacttcctgcatctccccctcttctttccacgcagcgcgctctcct 180
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 ccatgatgtgatctcacttcctgcatctccccctcttctttccacgcagcgcgctctcct 357
Query: 181 ccaggtctggccaagacacccctgtctgctctgggcctgaaaccccacaacccagcagac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 ccaggtctggccaagacacccctgtctgctctgggcctgaaaccccacaacccagcagac 297
Query: 241 atcttgctgcaccccacaggtggtgagtggctggaagggagggagggaaatggncaggga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 296 atcttgctgcaccccacaggtggtgagtggctggaagggagggagggaaatggccaggga 237
Query: 301 ggccaggagaaaccagtagtctgggcaggtgttctc 336
|||||||||||| |||||| ||||||||||||||||
Sbjct: 236 ggccaggagaaatcagtagcctgggcaggtgttctc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 336
Length of database: 736
Length adjustment: 9
Effective length of query: 327
Effective length of database: 727
Effective search space: 237729
Effective search space used: 237729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
