Query= MSMg01no352_h15.b1 MSMg01no352_h15.b1 CHROMAT_FILE:
MSMg01no352_h15.b1 PHD_FILE: MSMg01no352_h15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:45:02 2005
(296 letters)
>mm_chr1_129612857_129613553
Length = 697
Score = 516 bits (267), Expect = e-151
Identities = 285/291 (97%), Gaps = 1/291 (0%)
Strand = Plus / Plus
Query: 5 gaattcttcctttccatcctaggtcgtggattccacgtgtatttgtttctgcctctccaa 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttcctttccaccctaggtcgtggattccacgtgtatttgtttctgcctctccaa 264
Query: 65 cttatcacgttgcaaagcggtgccgtgattgacagctcagcactgatatcctgaatgcct 124
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 265 cttatcacgttgcaaagcggtgccgggattgacagctcagcactgatatcctgaatgcct 324
Query: 125 ggcacactacactgaaatcccgagtgcctggcacactatctctagctctgtaaaatgtct 184
|||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||
Sbjct: 325 ggcacactacactgaaatcctgagtgcctggcacactatctctagctcagtaaaatgtct 384
Query: 185 actgttcatttctgaattagtcatctgctccaaaaatagtgaatgaagagacctcagcag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 actgttcatttctgaattagtcatctgctccaaaaatagtgaatgaagagacctcagcag 444
Query: 245 aggagctgattctcatcaaaagtcatagttggtggtgggggg-agatgaat 294
|||||||||||||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 445 aggagctgattctcatcaaaagtcatagttgggggtgggggggagatgaat 495
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 296
Length of database: 697
Length adjustment: 9
Effective length of query: 287
Effective length of database: 688
Effective search space: 197456
Effective search space used: 197456
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no352_h15.g1 MSMg01no352_h15.g1 CHROMAT_FILE:
MSMg01no352_h15.g1 PHD_FILE: MSMg01no352_h15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:45:02 2005
(359 letters)
>mm_chr1_129817693_129818451
Length = 759
Score = 656 bits (339), Expect = 0.0
Identities = 351/355 (98%)
Strand = Plus / Minus
Query: 1 caggctagccagggctacacagggagaccttatcttaaagtggagttggaggtagtggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 509 caggctagccagggctacacagggagaccttatcttaaagtggagttggaggttgtggag 450
Query: 61 gagaagaaaaagataaaaaggagttaacaattccagatatagattctgaatggcaattac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 gagaagaaaaagataaaaaggagttaacaattccagatatagattctgaatggcaattac 390
Query: 121 tacttttcaagttactttaaagttctattgtatttcacttaatcttcaaaacacctgcta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 tacttttcaagttactttaaagttctattgtatttcacttaatcttcaaaacacctgcta 330
Query: 181 ggtgaacaaaagtatatttacatatccctctctccataaaataggtttgcagatgtgata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 ggtgaacaaaagtatatttacatatccctctctccataaaataggtttgcagatgtgata 270
Query: 241 caacttggcagaagaggtgtaatgcccagctttttaaaaagatttatttatttaatgtat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 caacttggcagaagaggtgtaatgcccagctttttaaaaagatttatttatttaatgtat 210
Query: 301 gtgagtacactgtagctgtcttcagacacaccagaagagggcatcggatcccatt 355
||||||||||||| |||||||||||||||||||||||||||| || |||||||||
Sbjct: 209 gtgagtacactgttgctgtcttcagacacaccagaagagggcgtcagatcccatt 155
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 359
Length of database: 759
Length adjustment: 9
Effective length of query: 350
Effective length of database: 750
Effective search space: 262500
Effective search space used: 262500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
