Query= MSMg01no353_g23.b1 MSMg01no353_g23.b1 CHROMAT_FILE:
MSMg01no353_g23.b1 PHD_FILE: MSMg01no353_g23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:46:19 2005
(453 letters)
>mm_chr1_11783600_11784451
Length = 852
Score = 779 bits (403), Expect = 0.0
Identities = 435/449 (96%), Gaps = 8/449 (1%)
Strand = Plus / Minus
Query: 5 gaattcagaataaattacagtgaagaaaatgaggaactttaagtgtttgtgacctacgtc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 gaattcagaataaattacagtgaagaaaatgaggaactttaagtgtttgtgacctacgtc 554
Query: 65 tttggaaaggagagaccataattttagttgatttctcaaaataatctttgactcgaaagg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 tttggaaaggagagaccataattttagttgatttctcaaaataatctttgactcgaaagg 494
Query: 125 gcttaagaactcccatttgtattggcttcttgtctcctgcaagatgagttacggtttcct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 gcttaagaactcccatttgtattggcttcttgtctcctgcaagatgagttacggtttcct 434
Query: 185 cagcaaattatgtgattccctccattggacaatccctaaatgtgtctgcaaatccatctt 244
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 cagcaaattacgtgattccctccattggacaatccctaaatgtgtctgcaaatccatctt 374
Query: 245 cttggatctcctcctggggttgaatagtctataaactcagagctgatttcactttttcaa 304
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 373 cttggatctcctcctggggttgaatagtctataaactcagagctgctttcactttttcaa 314
Query: 305 agttattttgttgtgagtcctctgttgctgtactgtaatctctggtcaaattcctctgtc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 agttattttgttgtgagtcctctgttgctgtactgtaatctctggtcaaattcctctgtc 254
Query: 365 ctcttttataccatgggcttgttcctcatttttcattctgaattcccccctctcaccccc 424
||||||||||||||||||||||||||| |||||| |||||||| |||||| |||
Sbjct: 253 ctcttttataccatgggcttgttcctcgtttttcgttctgaat-cccccc----acc--- 202
Query: 425 tccgctttcaaaagccttccttctgggag 453
|| ||||||||||| ||||||||||||||
Sbjct: 201 tctgctttcaaaaggcttccttctgggag 173
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 453
Length of database: 852
Length adjustment: 10
Effective length of query: 443
Effective length of database: 842
Effective search space: 373006
Effective search space used: 373006
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no353_g23.g1 MSMg01no353_g23.g1 CHROMAT_FILE:
MSMg01no353_g23.g1 PHD_FILE: MSMg01no353_g23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:46:19 2005
(395 letters)
>mm_chr1_11729388_11730182
Length = 795
Score = 764 bits (395), Expect = 0.0
Identities = 395/395 (100%)
Strand = Plus / Plus
Query: 1 caaatgttatgtaattgcagaaaccatctgctcttggcaataccatgcctttgctagagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caaatgttatgtaattgcagaaaccatctgctcttggcaataccatgcctttgctagagc 260
Query: 61 atgaggcaaatcatagtcagctactgcagtaagtccaaaacagccccatatgcccacacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgaggcaaatcatagtcagctactgcagtaagtccaaaacagccccatatgcccacacc 320
Query: 121 taggattaaaatgaaaaacatgtctttataatatttctgtgttttttaaaagaaaccaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taggattaaaatgaaaaacatgtctttataatatttctgtgttttttaaaagaaaccaaa 380
Query: 181 atttcaagtgtcattatgaatgtgtgcttgatcacgcatagacaggaggtacatatgcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atttcaagtgtcattatgaatgtgtgcttgatcacgcatagacaggaggtacatatgcaa 440
Query: 241 gaagtacaaatacatcaggatatatgctacttataagttcaagtccatcaggatatttgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaagtacaaatacatcaggatatatgctacttataagttcaagtccatcaggatatttgc 500
Query: 301 taattgcctatgactagatgaagttgggaaatacatagtctttggaatttgcctttgtaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taattgcctatgactagatgaagttgggaaatacatagtctttggaatttgcctttgtaa 560
Query: 361 gtaagttcagtaccatatgtttaatatgagtctca 395
|||||||||||||||||||||||||||||||||||
Sbjct: 561 gtaagttcagtaccatatgtttaatatgagtctca 595
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 395
Length of database: 795
Length adjustment: 9
Effective length of query: 386
Effective length of database: 786
Effective search space: 303396
Effective search space used: 303396
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
