Query= MSMg01no353_h09.b1 MSMg01no353_h09.b1 CHROMAT_FILE:
MSMg01no353_h09.b1 PHD_FILE: MSMg01no353_h09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:46:20 2005
(569 letters)
>mm_chr1_62031052_62032019
Length = 968
Score = 1025 bits (530), Expect = 0.0
Identities = 559/570 (98%), Gaps = 5/570 (0%)
Strand = Plus / Minus
Query: 1 gatgttcaaaaaaaaaaaaaaggcctgtgatccctcagaggactatcaataaatcagcag 60
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 gatgttc--aaaaaaaaaaaaggcctgtgatccctcagaggactatcaataaatcagcag 718
Query: 61 gcagaatctggtaggtttattttcctgactggaactaaggaatttgtactaaatcactac 120
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 717 gcagaatctggtaggtttatttttctgactggaactaaggaatttgtactaaatcactac 658
Query: 121 atatttgaaatattggttctcaaatgaaatatcaaaacagagagagagagagagaaaag- 179
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 657 atatttgaaatattggttctcaaatgaaatatcaaaac--agagagagagagagaaaaga 600
Query: 180 aaaaaaaataccttggcctgacatcttaatgcagcgttacaacaaaaacagagaaagtaa 239
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 599 aaaaaaaataccttggcctgacatcttaatgcagcgttacaacaaaaacagaaaaagtaa 540
Query: 240 aagttacatttccagagatagtcagcatgaaggaaccacaacagaaagccattttatctt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 aagttacatttccagagatagtcagcatgaaggaaccacaacagaaagccattttatctt 480
Query: 300 cattgcctgcttcagcaactagcttccaatacatgccttccaactgctttccttgttaag 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 cattgcctgcttcagcaactagcttccaatacatgccttccaactgctttccttgttaag 420
Query: 360 gactgagctgggtgataaaaatctggcacagttcaaatgtgcaaaggaataattactgat 419
|||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 419 gactgagctgggtgataaaaatcttgcacagttcaactgtgcaaaggaataattactgat 360
Query: 420 taactacacttacttttccttagtatttggatagtacctaaaattagcaagaaaaaaaat 479
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 359 taactacacttacttttccttagtatttggatagtatctaaaattagcaagaaaaaaaat 300
Query: 480 caacagagtattaattgaatgagaactaaacaaaagcgtcctatagatagacattgcgag 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 caacagagtattaattgaatgagaactaaacaaaagcgtcctatagatagacattgcgag 240
Query: 540 gcggtcattaaagttctgtactcctgttca 569
||| ||||||||||||||||||||||||||
Sbjct: 239 gcgatcattaaagttctgtactcctgttca 210
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 569
Length of database: 968
Length adjustment: 10
Effective length of query: 559
Effective length of database: 958
Effective search space: 535522
Effective search space used: 535522
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no353_h09.g1 MSMg01no353_h09.g1 CHROMAT_FILE:
MSMg01no353_h09.g1 PHD_FILE: MSMg01no353_h09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:46:21 2005
(457 letters)
>mm_chr1_61880787_61881644
Length = 858
Score = 855 bits (442), Expect = 0.0
Identities = 454/458 (99%), Gaps = 1/458 (0%)
Strand = Plus / Plus
Query: 1 atagtgtcccacatgtttgttctaatatgattatatttgtcctgtggattaaaatctcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atagtgtcccacatgtttgttctaatatgattatatttgtcctgtggattaaaatctcca 260
Query: 61 actccaggggagtactattttataaataactcctgtgttccccttacctgctgtagataa 120
||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 261 actccaggggagtactattttgtaaataactcctgtgttccccttacctgctgtggataa 320
Query: 121 gacatcgttatccattcttttatcttgattgtacttattggctttgtgttcattggaaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gacatcgttatccattcttttatcttgattgtacttattggctttgtgttcattggaaga 380
Query: 181 agaacccattatgtttgaatacattatctatatatttggatgtctgtgacttccttgcca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agaacccattatgtttgaatacattatctatatatttggatgtctgtgacttccttgcca 440
Query: 241 atgtttatgatgactttggggagggcaatgagggctttgggaataggttgtttttttt-c 299
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 441 atgtttatgatgactttggggagggcaatgagggctttgggaataggttgtttttttttc 500
Query: 300 tctgtcaccctgggagtagttcagtatatagtgtgtccccaagaactcagaatattagtg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tctgtcaccctgggagtagttcagtatatagtgtgtccccaagaactcagaatattagtg 560
Query: 360 ggtctagcctatcaagtgcttggatgcccagaaggcagacaagagccacaccagagggat 419
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggtctagcctatcaggtgcttggatgcccagaaggcagacaagagccacaccagagggat 620
Query: 420 gagcatattatatgtcttctgtctaccttgatgagttg 457
||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gagcatattatatgtcttctgtctaccttgatgagttg 658
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 457
Length of database: 858
Length adjustment: 10
Effective length of query: 447
Effective length of database: 848
Effective search space: 379056
Effective search space used: 379056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
