Query= MSMg01no354_c19.b1 MSMg01no354_c19.b1 CHROMAT_FILE:
MSMg01no354_c19.b1 PHD_FILE: MSMg01no354_c19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:47:15 2005
(592 letters)
>mm_chr1_94740412_94741403
Length = 992
Score = 1077 bits (557), Expect = 0.0
Identities = 578/585 (98%)
Strand = Plus / Minus
Query: 8 ttcctgttctgacttctttccatgatgaagagccatacagaggtataagcagaataaacc 67
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 915 ttcctgtcctgacttctttccatgatgaagagccatacagaggtataagcagaataaacc 856
Query: 68 ttttcctctccaacttgctttttgctcatggtgtttcgtcgaagccatagaaaccctaag 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 855 ttttcctctccaacttgctttttgctcatggtgtttcgtcgaagccatagaaaccctaag 796
Query: 128 acatgggatgtgatctaactgaagtcactgtcaccggtgggcattcacccacaagcacac 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 acatgggatgtgatctaactgaagtcactgtcaccggtgggcattcacccacaagcacac 736
Query: 188 agttcagccgggatgactgaggttcccagcagtgatgtgactcacccacatcagaccctg 247
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 735 agttcagccgggatgactgaggttcccagcagtgatgtgacccacccacatcagaccctg 676
Query: 248 gggcggctgagctccttcccccggcccaggcttggctggtgtgtgagacctctggagctc 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 gggcggctgagctccttcccccggcccaggcttggctggtgtgtgagacctctggagctc 616
Query: 308 tcaggcagccagccagtattcctagggacacagacgaatgctcgcccataaaagcagggc 367
|||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 615 tcaggcagtcagccaggattcctagggacacagacgaatgctcgcccgtaaaagcagggc 556
Query: 368 tccatggttcttgctggagtcagatgtggccactgtactggtcagcaaagttcctgtctg 427
|||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 555 tccagggttcttgctggagtcagatgtggccactgcactggtcagcaaagttcctgtctg 496
Query: 428 gtcctggccaagctttctgaaaatgagatctcaggctgctgggcaagggtctgcaaggtc 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 gtcctggccaagctttctgaaaatgagatctcaggctgctgggcaagggtctgcaaggtc 436
Query: 488 ctgctaggaggccatccctcctgttactgatgacagtctcacaacccagcccagaaaggc 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 ctgctaggaggccatccctcctgttactgatgacagtctcacaacccagcccagaaaggc 376
Query: 548 ccctcctaaccccaccaagtactcctgggactcctacccagcagg 592
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 ccctcctaaccccaccaagtactcctgggactcctacccagcagg 331
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 592
Length of database: 992
Length adjustment: 10
Effective length of query: 582
Effective length of database: 982
Effective search space: 571524
Effective search space used: 571524
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no354_c19.g1 MSMg01no354_c19.g1 CHROMAT_FILE:
MSMg01no354_c19.g1 PHD_FILE: MSMg01no354_c19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:47:15 2005
(456 letters)
>mm_chr1_94592398_94593253
Length = 856
Score = 812 bits (420), Expect = 0.0
Identities = 447/456 (98%), Gaps = 1/456 (0%)
Strand = Plus / Plus
Query: 1 cactccctggtgactaaaccttcaaatatatgagcctatgggggccgttcttattcaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 cactccctggtgactaaaccttcaaatatatgagcctatgggggccgttcttattcaaac 261
Query: 61 caccacaatgcccatcaaattggttttcatgtgcttgcaatcccagaagtttacagagag 120
||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 262 cac-acaatgcccatcaaattggttttcatgtgcttgcaatcccagaaatttacagagag 320
Query: 121 aaactcatgagaaaaacaatgacatcactcagcattaaacacagaggcacaacttgcagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaactcatgagaaaaacaatgacatcactcagcattaaacacagaggcacaacttgcagt 380
Query: 181 aaacagaggcaaactgctcaggaacacaaaccctgagaaacagcacactggaccgagagc 240
||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 381 aaacagaggcaaactgctcgggaacacaaaccctgagaaacagcacactggactgagagc 440
Query: 241 tgcccaggatccagagggcagggggtagtcgcgggtctgagaggcccctacaggcctctt 300
||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgcccaggagccagagggcagtgggtagtcgcgggtctgagaggcccctacaggcctctt 500
Query: 301 gtctggatgcttatccacatgttcagagattttctcgtcggagaaatatcatacaattag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtctggatgcttatccacatgttcagagattttctcgtcggagaaatatcatacaattag 560
Query: 361 acatgagtgggtgagtttaataccacccaaggccccctggtgccaggctggtcagcgccc 420
||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 561 acatgagtgggtgagtttaatactacccaaggacccctggtgccaggctggtcagcgccc 620
Query: 421 tttctagccggtaattcccggtcctcattccccagg 456
|||||||| |||||||||||||||||||||||||||
Sbjct: 621 tttctagctggtaattcccggtcctcattccccagg 656
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 456
Length of database: 856
Length adjustment: 10
Effective length of query: 446
Effective length of database: 846
Effective search space: 377316
Effective search space used: 377316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
