NTATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCTACCATATCTTCAAAGAACAACTCATAGCATTACTACTCAAA
TTATTCCACAAAATGGAAACAGAAGGAACACTACCTAATTCATTCTACAA
AGCCACGGTTACTCTGATAGCTAAACCATACAAAGACCCAAAAAAGAAAG
AGAATTTCAGGCCAAATATACTGATAAATATCGATGCAAAAATATTCAAT
AAAATTTTCACAAACTGACTCCTAAAACACATCAAAACCAACAATCACCA
AGATCAAGTAAGTTTTATCCCAGAAATGCAGGCATGGTTTGTTATATGAA
AATCCATCAACATAATACACTATATAAACAAATTCAAGGAAGAGAAATCA
CAGGATAATTTCATTAGATGCTAAAGAAAGCCTTCAACAAAATACAACAC
CTGGCCATGTAAAAAGTCTTGGGGAGATCAGGAATTCATGGCACATGCCT
GTACATAATAAAAGCTATATATAGCAAAGCAACAGCCACCATCAAACTAA
ATGGAGAGAAACTAAAAGCAATCCCATTAAAATCAATGTCAAAAAAACAA
AAACAAAACAAAACTAAACTAAACAAACAAAAACAGGTTGTGTGTTCTCT
CCTTATCAAGTATAGTACTTGAAGTTCTAGCTAGAGTCATTAGACAACAA
AAGGAGATCTAGGGGATATGTGAGATGCCTGACTTGCCATCAAGATAGAC
GCN

NCTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXTGGAATTTCTTGATTTGTGAATA
CTTAGGTTCCCCAGGATAAGACTTAGCACTACTTACTCTCTCTACTTCCT
TTTTCAAGGTATGGCTGGTTTTACTTCTTAGGCAGAAGCTCATCACTACT
TCATAATAACTACTAAACATTCATGGCTCTGTTTAAAATTATCTGCTCTA
AGACATGCTTTTACCATCCTGACAAAATAACTGTATATCCTTTCCAGGAA
CTCCTAGTCATATGACATGTGCTTATTTCGTTACATACTCCATTATATTG
TGCGCTGTGTGCTGGCGGCACTTTTTGTTTTCTTTTTCTTATTTTTAACT
TGAGACATATTTATGGTTCCCTAGAACTTCCATCATGATCATAATAAGAG
GCATGAAATAATATTTAAAGATTAAATTTCCTAATATTACAAGAACAGGG
AGCAGTGGAATGGTAGATGGGGAGGGGGTGGGGAATGNAATATGTTNTGT
NNNNNTTGNTTTTTTTTTTTTNTTTTTTTTTNTTNTTTTTCTTGTTTTGT
TTTTTTTNTTTTTTNTTTTGTTTCCATTTTGTTTTCTTCTCTTTTCNTTA
TTTTTTTATTGCGACCACTTTAACTGTATATCAGCTGTCTTGACATTTTC
TTTACCCCCTGTTTGTTTTCATGAACCCCCCGCAATATCTTTTCTTCCCT
CCC

Query= MSMg01no354_n02.g1 MSMg01no354_n02.g1 CHROMAT_FILE:
MSMg01no354_n02.g1 PHD_FILE: MSMg01no354_n02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:48:05 2005
         (459 letters)



>mm_chr1_100856016_100856873
          Length = 858

 Score =  841 bits (435), Expect = 0.0
 Identities = 453/459 (98%), Gaps = 1/459 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tggaatttcttgatttgtgaatacttaggttccccaggataagacttagcactacttact 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 tggaatttcttgatttgtgaatacttaggttccccaggataagacttagcactacttact 599

                                                                       
Query: 61  ctctctacttcctttttcaaggtatggctggttttacttcttaggcagaagctcatcact 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 ctctctacttcctttttcaaggtatggctggttttacttcttaggcagaagctcatcact 539

                                                                       
Query: 121 acttcataataactactaaacattcatggctctgtttaaaattatctgctctaagacatg 180
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 538 acttcataataactactaaactttcatggctctgtttaaaattatctgctctaagacatg 479

                                                                       
Query: 181 cttttaccatcctgacaaaataactgtatatcctttccaggaactcctagtcatatgaca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 cttttaccatcctgacaaaataactgtatatcctttccaggaactcctagtcatatgaca 419

                                                                       
Query: 241 tgtgcttatttcgttacatactccattatattgtgcgctgtgtgctggcggcactttttg 300
           ||||||||||| |||||||||||||||||| |||||||||||||||||| ||| ||||||
Sbjct: 418 tgtgcttattttgttacatactccattatactgtgcgctgtgtgctggcagcattttttg 359

                                                                       
Query: 301 ttttctttttcttatttttaacttgagacatatttatggttccctagaacttccatcatg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 ttttctttttcttatttttaacttgagacatatttatggttccctagaacttccatcatg 299

                                                                       
Query: 361 atcataataagaggcatgaaataatatttaaagattaaatttcctaatattacaagaaca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 atcataataagaggcatgaaataatatttaaagattaaatttcctaatattacaagaaca 239

                                                  
Query: 421 gggagcagtggaatggtagatggggagggggtggggaat 459
           |||||||||||||||||||||||||||||| ||||||||
Sbjct: 238 gggagcagtggaatggtagatggggagggg-tggggaat 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 459
Length of database: 858
Length adjustment: 10
Effective length of query: 449
Effective length of database: 848
Effective search space:   380752
Effective search space used:   380752
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)