NNNTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCTATAGTTACCTTGCTGAGGTGTTGGGGGAGATATATTGAA
AACTCTGAATATAGGCAGGCAAGTAGGAATTTATAGGCACAGAGGAGGCT
GGGTCAGTGGCTGGATATCTGGTAAGAGGAAATGTGACAGGTGCTTTAGT
TGTCAGCTCACTCTTGGGAAGAGGGAATCTCAATTGAGGAATTGCCTCTA
TGAGATTGGCCTGTGGGCCATCTCATGAGATTTTATTGATTGTTAATTAA
TGTAGGAGGAGCCAGCCCACTGGTTTCACTATGAAAAAAGCTAGCTGAGC
AAGCTAGAGGGAGTGAGGCAATAGGTAGATGTATGGAAGAAGCTAGCTGA
AGCCAGGCATGGTAGTGTGTTCCTTGTAATCCTGGCAGTCAGAAGGCAGA
GGCAGGTGGATCTCCATGGCTGGGTAACAAAGCAAGTTCCTGGCCAGCCA
AGACTACACATTAAGTTGTTGTCTAAAAACCAAATCAAACAACACACACA
CACACACACACACACACACACACTCACACACACATCTTCACATACTCATT
TNNANNNCTTTTTTACATTNTATTTATTATATTTACTTCTATTTNNNTTC
TCCANACTTCGCAGTGTTTTTTTTTTTCTGTATNCCTCCCTNTTCTTTCC
NCTTTGNNTTATTTTGNCTTTTATTTTCCTTATTCCCTCCTTTTTTTTTT
TTTCG

NCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTTCCACCATTAGGAAAGGC
AAATTTTTATCATTTTCACAAAAATGAATGGAACAAGAGGTCACCATGTT
AAACAAAGACACAGAAGGCTATAGAGTCCATGTTTCCCCTCATACATGAA
ACTATGGAAGTAGACTTGAAAGTAATGAAGGGTACCAGGGAAAGGTAGAG
AGCCCTGGAAAGTGGGGAGAAAAGAGAGAGTAAAAGAGGATATAGGAAGA
GAGTTATCTTTAGGGAAGACACAAGAAAAGCATGTATAGAATGCTACAGT
AAAACTCATTCATATATATATGTGTACATTATATACATTAATAACTATCA
TATACATTAATGATTACAACATGAAAGAAAACAGTGTTACAATTATTATC
ACAGAACTTAGATGGAAAATGGAGAGGAAATGATTGCCCCAAACCAAAAA
AGAAAACACAAGCAGATGATGTTAGGAACTCAGATAATCAAGAGGTCAAG
CTGGGTTTCTCTTGGATGTTTGTCTTATACTTCAGCTCTCTTCCTGCCAA
TCCATAGTTCCTATGCTCACTACTGAAGCCATCTTTAAATTTCCATATAC
TCAAGTAATTTTAAGGATCTGTTTTGTTACTTCATATGANGACCATTTTT
AATTTATGCTCTCCTTATATTTTGTGAGAATTACCAGAANAAAATGATTC
TTCAAAGAG

Query= MSMg01no354_n09.g1 MSMg01no354_n09.g1 CHROMAT_FILE:
MSMg01no354_n09.g1 PHD_FILE: MSMg01no354_n09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:48:07 2005
         (589 letters)



>mm_chr1_23575700_23576688
          Length = 989

 Score = 1108 bits (573), Expect = 0.0
 Identities = 585/589 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttttccaccattaggaaaggcaaatttttatcattttcacaaaaatgaatggaacaagag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttttccaccattaggaaaggcaaatttttatcattttcacaaaaatgaatggaacaagag 260

                                                                       
Query: 61  gtcaccatgttaaacaaagacacagaaggctatagagtccatgtttcccctcatacatga 120
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 261 gtcaccatgttaaacaaagacacagaaggctatagagtccatgtatcccctcatacatga 320

                                                                       
Query: 121 aactatggaagtagacttgaaagtaatgaagggtaccagggaaaggtagagagccctgga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aactatggaagtagacttgaaagtaatgaagggtaccagggaaaggtagagagccctgga 380

                                                                       
Query: 181 aagtggggagaaaagagagagtaaaagaggatataggaagagagttatctttagggaaga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagtggggagaaaagagagagtaaaagaggatataggaagagagttatctttagggaaga 440

                                                                       
Query: 241 cacaagaaaagcatgtatagaatgctacagtaaaactcattcatatatatatgtgtacat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cacaagaaaagcatgtatagaatgctacagtaaaactcattcatatatatatgtgtacat 500

                                                                       
Query: 301 tatatacattaataactatcatatacattaatgattacaacatgaaagaaaacagtgtta 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tatatacattaataactatcatatacattaatgattacaacatgaaagaaaacagtgtta 560

                                                                       
Query: 361 caattattatcacagaacttagatggaaaatggagaggaaatgattgccccaaaccaaaa 420
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 561 caattattatcacagaacttagatggaaaatggagaggaaatgtttgccccaaaccaaaa 620

                                                                       
Query: 421 aagaaaacacaagcagatgatgttaggaactcagataatcaagaggtcaagctgggtttc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aagaaaacacaagcagatgatgttaggaactcagataatcaagaggtcaagctgggtttc 680

                                                                       
Query: 481 tcttggatgtttgtcttatacttcagctctcttcctgccaatccatagttcctatgctca 540
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttttggatgtttgtcttatacttcagctctcttcctgccaatccatagttcctatgctca 740

                                                            
Query: 541 ctactgaagccatctttaaatttccatatactcaagtaattttaaggat 589
           |||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 741 ctactgaagccatctttacatttccatatactcaagtaattttaaggat 789


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 589
Length of database: 989
Length adjustment: 10
Effective length of query: 579
Effective length of database: 979
Effective search space:   566841
Effective search space used:   566841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)