TTAGTCCTCATGTCACTXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCTTTGGTTACCTCTGAGCCCCATTTTTTAATGGGGTTATTTGATTTTC
AGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCCCTA
TCTGATTTAGGATACGTAAAGATCCTTTCCCAATCTGTTGGTGGTCTTTT
TGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCATTA
GGTCCCATTTGTCAATTCTCGATCTTACAGCACAAGCCATTGCTGTTCTG
TTCAGGAATCTTTCCCTTGTGCCCATATCTTCAAGGCTTTTCCCCACTTT
CTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAATTCCTCGATCC
ACTTAGATTTGACCTTAGTACAAGGAGATAAGTATGGTTTGATTCGCATT
CTTCTACATGATAACAACCAGTTGTGCCAACACCAATTGTTGAAAATGCT
GTCTTTCTTCCACTGGATGGTTTTAGCTCCCTTTTCGAAGATCAAGTGAC
CATAGGTGTGTGGGTTCATTTCTGGGTCTTCAATTCTATTCCATTAGTCT
ACTTGTCTGTCTCTATACCAGTACCATGCAGTTTTTATCACAATTGCTCT
GTATTAAAGCTTTATGTCACGCATGGCGATTCCACCAGAGGTTCTTTTAT
CTTTGAAAAAAGGTTTTGCTATCCTAGGTCTTTTGTTATTCCCTATGN

AATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXTTTCTGGATATCTTGTTTTTGCACCACAC
ACATAAAAATAAACTGGTGTGATTATATGAAATGTAGATTTGTGCTCACC
ATTTATTTCCCAAGGAACCCAGCTAAACTAAAAATTTAACTTCAGGGGAT
GCTTGCCTTGATTATAAATTAAGATTCATTTTCTTAAAGGGAATTGGAAT
ATCTTACAAAATATTGGTGGCTTTAGGCTATATTATTTCTAACCACTTTG
GTGTATGAATTAAATATAATTTAATTATATTTTAATATATCCCTAATTTT
GGCTCAAATCTTAAAGATAATCAGAGAAAGTATAAGCTATAAGTAATTAT
TGCTCACATTAAATAATGTTTAGTTAATTCACTAAAAACTAAAATCTGTC
TATTTCTGTTTTCTTTAGTTTTGCAAGACAGGCAATAATGCATATTTTAG
TAGAGGTTGGTTGATTGCAAAATAGCTCCCATAGATCAGAATTTGATTTC
TGGTGTGGGCAATTCAATGAATCATTTATTATATCATGCACAGGTGTTCA
TTATGAAAGTGTAATATTATAGTGGATAGAGCAGCTATTCTCTCAAGAAC
ATTCAAGTGGAAAACTGCCTTAGGGACTATGAAAAAGGTATTAAATGACC
ATTAAGTGCTACCTTTTTTACCTTATGNTGTAATTCAATTGAATGGACCC
TCTATTTTTTA

Query= MSMg01no355_k11.g1 MSMg01no355_k11.g1 CHROMAT_FILE:
MSMg01no355_k11.g1 PHD_FILE: MSMg01no355_k11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:49:10 2005
         (514 letters)



>mm_chr1_149324613_149325526
          Length = 914

 Score =  799 bits (413), Expect = 0.0
 Identities = 437/445 (98%)
 Strand = Plus / Minus

                                                                       
Query: 70  tgtgctcaccatttatttcccaaggaacccagctaaactaaaaatttaacttcaggggat 129
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 914 tgtgctcaccatttatttcccaaggaacccagctaaactaaaattttaacttcaggggat 855

                                                                       
Query: 130 gcttgccttgattataaattaagattcattttcttaaagggaattggaatatcttacaaa 189
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 854 acttgccttgattataaattaagattcattttcttaaagggaattggaatatcttagaaa 795

                                                                       
Query: 190 atattggtggctttaggctatattatttctaaccactttggtgtatgaattaaatataat 249
           |||||||||| ||| ||||||||||||||||||||||||||||||| |||| ||||||||
Sbjct: 794 atattggtggttttgggctatattatttctaaccactttggtgtattaattcaatataat 735

                                                                       
Query: 250 ttaattatattttaatatatccctaattttggctcaaatcttaaagataatcagagaaag 309
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 ttaattatattttaatatatccctaattttggctcaaatcttaaagataatcagagaaag 675

                                                                       
Query: 310 tataagctataagtaattattgctcacattaaataatgtttagttaattcactaaaaact 369
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 674 tataagctataagtaattattgctcacattaaataatgtgtagttaattcactaaaaact 615

                                                                       
Query: 370 aaaatctgtctatttctgttttctttagttttgcaagacaggcaataatgcatattttag 429
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 aaaatctgtctatttctgttttctttagttttgcaagacaggcaataatgcatattttag 555

                                                                       
Query: 430 tagaggttggttgattgcaaaatagctcccatagatcagaatttgatttctggtgtgggc 489
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 tagaggttggttgattgcaaaatagctcccatagatcagaatttgatttctggtgtgggc 495

                                    
Query: 490 aattcaatgaatcatttattatatc 514
           |||||||||||||||||||||||||
Sbjct: 494 aattcaatgaatcatttattatatc 470


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 514
Length of database: 914
Length adjustment: 10
Effective length of query: 504
Effective length of database: 904
Effective search space:   455616
Effective search space used:   455616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)