Query= MSMg01no356_h18.b1 MSMg01no356_h18.b1 CHROMAT_FILE:
MSMg01no356_h18.b1 PHD_FILE: MSMg01no356_h18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:50:13 2005
(564 letters)
>mm_chr1_187639530_187640493
Length = 964
Score = 746 bits (386), Expect = 0.0
Identities = 406/420 (96%), Gaps = 12/420 (2%)
Strand = Plus / Minus
Query: 157 ctcctgggacccacatccctcagaaggaggaaaagtaagcccataagtgggtctctgacc 216
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 964 ctcctgggacccacatccctcagaaggaggaaaagcaagcccataagtgggtctctgacc 905
Query: 217 tccctactgtggcatgtccacatcccccacgccacacaaaaataaataaataatagaaca 276
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 904 tccctactgtggcatgtccacatcccccacaccacacaaaaataaataaataatagaaca 845
Query: 277 tttaatactcctacgactctggcctggctgagcacttgaaaatccagctctgcctctcaa 336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 844 tttaatactcctacgactctggcctggctgagcacttgaaaatccagctctgcctctcaa 785
Query: 337 gccagctg------------attttatcgagctttgtcttcctgagtttggcagaaccta 384
|||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 gccagctgcacgtacacctcattttatcgagctttgtcttcctgagtttggcagaaccta 725
Query: 385 ggctttcccgggatggtatgtaaagctccttcattatcaagactgctggtatcactttcc 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 ggctttcccgggatggtatgtaaagctccttcattatcaagactgctggtatcactttcc 665
Query: 445 aacagaatttattatatttcagtaattctcatatttttaactgttgcgttgttgtcaatt 504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 aacagaatttattatatttcagtaattctcatatttttaactgttgcgttgttgtcaatt 605
Query: 505 ctggtgacttgtctttgacattacagctgtaatcatttgagggtacctcaatagcaactg 564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 ctggtgacttgtctttgacattacagctgtaatcatttgagggtacctcaatagcaactg 545
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 564
Length of database: 964
Length adjustment: 10
Effective length of query: 554
Effective length of database: 954
Effective search space: 528516
Effective search space used: 528516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no356_h18.g1 MSMg01no356_h18.g1 CHROMAT_FILE:
MSMg01no356_h18.g1 PHD_FILE: MSMg01no356_h18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:50:13 2005
(433 letters)
>mm_chr1_187477927_187478759
Length = 833
Score = 810 bits (419), Expect = 0.0
Identities = 428/431 (99%), Gaps = 1/431 (0%)
Strand = Plus / Plus
Query: 1 agttaatagttaaagtgcatatcagcatcttatatatgtttcaggtactcagtaatgttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agttaatagttaaagtgcatatcagcatcttatatatgtttcaggtactcagtaatgttt 260
Query: 61 ttaggtcatcagaggtttagggttcccaatatgtaagcacctaaattcctgtgtattttt 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 261 ttaggtcatcagaggtttagggttcccaatatgtaagcacctaaattcttgtgtattttt 320
Query: 121 ttaactcttttaaaaaaagatttatttatttattttatgtatgtaagtacgctgccactc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttaactcttttaaaaaaagatttatttatttattttatgtatgtaagtacgctgccactc 380
Query: 181 tgttcagacacaccagaagaggttatcagatctcattacagatggttgtgagccaccatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgttcagacacaccagaagaggttatcagatctcattacagatggttgtgagccaccatg 440
Query: 241 tggttgctgggaattgaactcaggacctctggaagagcagtcaacgctcttaaccactaa 300
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 441 tggttgctgggaattgaactcaagacctctggaagagcagtcaacgctcttaaccactaa 500
Query: 301 gccatctttcagcccctattttttttttaactcttagtggaatagtttaaattcttttaa 360
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 501 gccatctttcagcccctattttttttt-aactcttagtggaatagtttaaattcttttaa 559
Query: 361 ctcatgaatctctttgtctgctattcttgctattttaaaaaagcatttattatgtattta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ctcatgaatctctttgtctgctattcttgctattttaaaaaagcatttattatgtattta 619
Query: 421 ttaattattta 431
|||||||||||
Sbjct: 620 ttaattattta 630
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 433
Length of database: 833
Length adjustment: 9
Effective length of query: 424
Effective length of database: 824
Effective search space: 349376
Effective search space used: 349376
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
